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  1. The present study aimed to investigate the changes in volatile components and metabolites of Dendrobium officinale (D. officinale) juice fermented with starter cultures containing Saccharomycopsis fibuligera and

    Authors: Wanlin Liu, Xiaoye Luo, Shuyi Qiu, Wu Huang, Yanan Su and Linling LI
    Citation: BMC Microbiology 2023 23:67
  2. Campylobacter species (spp.) are one of the most important zoonotic bacteria possessing potential hazards for animal and human health worldwide. Migratory birds are implicated as significant carriers for microbes...

    Authors: Maram M. Tawakol, Nehal M. Nabil, Abdelhafez Samir, Hawash H. M., Ahlam E. Yonis, Momtaz A. Shahein and Mona M. Elsayed
    Citation: BMC Microbiology 2023 23:66
  3. The determination of the microbiological quality and safety of raw milk and the associated influencing factors at the farm level is very critical given that the quality or safety of subsequent products that ar...

    Authors: Abiot Deddefo, Gezahegne Mamo, Minda Asfaw and Kebede Amenu
    Citation: BMC Microbiology 2023 23:65
  4. The prevalence of multidrug-resistant hypervirulent K. pneumoniae (MDR-hvKP) has gradually increased. It poses a severe threat to human health. However, polymyxin-resistant hvKP is rare. Here, we collected eight ...

    Authors: Mengli Tang, Jun Li, Zhaojun Liu, Fengjun Xia, Changhang Min, Yongmei Hu, Haichen Wang and Mingxiang Zou
    Citation: BMC Microbiology 2023 23:64
  5. In the absence of effective antiviral drugs or vaccines, early and accurate detection of SARS-CoV-2 infection is essential to the COVID-19 pandemic. This study developed and evaluated a novel rapid One-Step LA...

    Authors: Sayyad Khanizadeh, Asra Malekshahi, Hooman Hanifehpour, Mehdi Birjandi and Shirzad Fallahi
    Citation: BMC Microbiology 2023 23:63
  6. The freshwater microbiome regulates aquatic ecological functionality, nutrient cycling, pathogenicity, and has the capacity to dissipate and regulate pollutants. Agricultural drainage ditches are ubiquitous in...

    Authors: Yichao Shi, Izhar U. H. Khan, Devon Radford, Galen Guo, Mark Sunohara, Emilia Craiovan, David R. Lapen, Phillip Pham and Wen Chen
    Citation: BMC Microbiology 2023 23:62
  7. Clostridioides difficile is a spore forming bacterial species and the major causative agent of nosocomial gastrointestinal infections. C. difficile spores are highly resilient to disinfection methods and to preve...

    Authors: Dmitry Malyshev, Imogen Anne Jones, Matthew McKracken, Rasmus Öberg, Glenn M. Harper, Lovleen Tina Joshi and Magnus Andersson
    Citation: BMC Microbiology 2023 23:59
  8. Genital Chlamydia trachomatis infection is the most common bacterial sexual transmitted disease that causes severe complications including pelvic inflammatory disease, ectopic pregnancy, and infertility in female...

    Authors: Heng Choon Cheong, Yi Ying Cheok, Yee Teng Chan, Ting Fang Tang, Sofiah Sulaiman, Chung Yeng Looi, Rishein Gupta, Bernard Arulanandam, Li-Yen Chang and Won Fen Wong
    Citation: BMC Microbiology 2023 23:58
  9. Heavy metal pollution has become a major source of environmental pollution because of increasing industrialization. Microbial remediation is a promising approach to remediate lead-contaminated environments owi...

    Authors: Qingrong Li, Wenbo Zhang, Sentai Liao, Dongxu Xing, Yang Xiao, Donglai Zhou and Qiong Yang
    Citation: BMC Microbiology 2023 23:57
  10. Plant-derived compounds can be used as antimicrobial agents in medicines and as food preservatives. These compounds can be applied along with other antimicrobial agents to strengthen the effect and/or reduce t...

    Authors: Sepideh Asadi, Bahar Nayeri-Fasaei, Taghi Zahraei-Salehi, Ramak Yahya-Rayat, Nemat Shams and Aram Sharifi
    Citation: BMC Microbiology 2023 23:55
  11. Trichoderma asperellum and Tharzianum were assessed in this study as a potential biological control against Colletotrichum truncatum. C. truncatum is a hemibiotrophic fungus that causes anthracnose disease in c...

    Authors: Mukesh Yadav, Kumari Divyanshu, Manish Kumar Dubey, Ashutosh Rai, Sunil Kumar, Yashoda Nandan Tripathi, Vaishali Shukla and Ram Sanmukh Upadhyay
    Citation: BMC Microbiology 2023 23:54
  12. Irinotecan is a chemotherapeutic agent used to treat a variety of tumors, including colorectal cancer (CRC). In the intestine, it is transformed into SN-38 by gut microbial enzymes, which is responsible for it...

    Authors: Marwa S. Mahdy, Ahmed F. Azmy, Tarek Dishisha, Wafaa R. Mohamed, Kawkab A. Ahmed, Ahmed Hassan, Sahar El Aidy and Ahmed O. El-Gendy
    Citation: BMC Microbiology 2023 23:53
  13. It is increasingly being recognised that changes in the gut microbiome have either a causative or associative relationship with colorectal cancer (CRC). However, most of this research has been carried out in a...

    Authors: Mayilvahanan Bose, Henry M. Wood, Caroline Young, Philip Quirke and Ramakrishan Ayloor Seshadri
    Citation: BMC Microbiology 2023 23:52
  14. Host associated gut microbiota are important in understanding the coevolution of host-microbe, and how they may help wildlife populations to adapt to rapid environmental changes. Mammalian gut microbiota compo...

    Authors: Sufia Akter Neha and Jorge Salazar-Bravo
    Citation: BMC Microbiology 2023 23:51
  15. Thermophilic composting is a promising method of sanitizing pathogens in manure and a source of agriculturally important thermostable enzymes and microorganisms from organic wastes. Despite the extensive studi...

    Authors: Felix Matheri, Anne Kelly Kambura, Maina Mwangi, Nehemiah Ongeso, Edward Karanja, Noah Adamtey, Elias Kihara Mwangi, Edwin Mwangi, Chrysantus Tanga, Martha Wangu Musyoka and Steven Runo
    Citation: BMC Microbiology 2023 23:50
  16. The emergence of carbapenem-resistant Enterobacterales (CRE) continues to threaten public health due to limited therapeutic options. In the current study the incidence of carbapenem resistance among the 104 clini...

    Authors: Mehri Haeili, Samaneh Barmudeh, Maryam Omrani, Narges Zeinalzadeh, Hossein Samadi Kafil, Virginia Batignani, Arash Ghodousi and Daniela Maria Cirillo
    Citation: BMC Microbiology 2023 23:49
  17. The use of flow cytometry to enumerate microorganisms is gaining traction over the traditional plate count technique on the basis of superior accuracy, precision and time-to-result. Here, we assessed the suita...

    Authors: Harry Tracey, Niall Coates, Eleri Hulme, Daniel John, Daryn Robert Michael and Susan Frances Plummer
    Citation: BMC Microbiology 2023 23:48
  18. Sediment bacterial communities play a critical role in biogeochemical cycling in alpine lake ecosystems. However, little is known about the sediment microbial communities in these lakes. In this study, the bac...

    Authors: Keqiang Shao, Lei Zhang, Tunasheng Ba, Jianying Chao and Guang Gao
    Citation: BMC Microbiology 2023 23:47
  19. Elevated carbon dioxide concentrations (eCO2), one of the main causes of climate change, have several consequences for both vine and cover crops in vineyards and potentially also for the soil microbiome. Hence so...

    Authors: David Rosado-Porto, Stefan Ratering, Yvette Wohlfahrt, Bellinda Schneider, Andrea Glatt and Sylvia Schnell
    Citation: BMC Microbiology 2023 23:46
  20. The phylum Chloroflexi is highly abundant in a wide variety of wastewater treatment bioreactors. It has been suggested that they play relevant roles in these ecosystems, particularly in degrading carbon compou...

    Authors: Patricia Bovio-Winkler, Leandro D. Guerrero, Leonardo Erijman, Pía Oyarzúa, María Eugenia Suárez-Ojeda, Angela Cabezas and Claudia Etchebehere
    Citation: BMC Microbiology 2023 23:45
  21. Impaired respiratory and intestinal microbiome composition is linked to cystic fibrosis lung disease severity. In people with cystic fibrosis (pwCF), regular exercise is recommended to delay disease progressio...

    Authors: Rebecca L. Knoll, Víctor Hugo Jarquín-Díaz, Jonas Klopp, Alissa Kemper, Katja Hilbert, Barlo Hillen, Daniel Pfirrmann, Perikles Simon, Viola Bähner, Oliver Nitsche, Stephan Gehring, Lajos Markó, Sofia K. Forslund and Krystyna Poplawska
    Citation: BMC Microbiology 2023 23:44
  22. Staphylococcus aureus is one of the prevalent etiological agents of contagious bovine mastitis, causing a significant economic burden on the global dairy industry. Given the emergence of antibiotic resistance (AB...

    Authors: Satwik Majumder, Trisha Sackey, Charles Viau, Soyoun Park, Jianguo Xia, Jennifer Ronholm and Saji George
    Citation: BMC Microbiology 2023 23:43
  23. Artisanal and small-scale gold mining activities are producing contamination with heavy metals and metalloids (HMM) into soils and water worldwide. The HMM are considered as one of the major abiotic stresses d...

    Authors: Juan Pablo Suárez, Paulo Herrera, Carolina Kalinhoff, Oscar Vivanco-Galván and Selvaraj Thangaswamy
    Citation: BMC Microbiology 2023 23:42
  24. Cotton Verticillium wilt, causing by Verticillium dahliae, has seriously affected the yield and quality of cotton. The incidence of Verticillium wilt in cotton fields has been on the rise for many years, especial...

    Authors: Yun Zhang, Yuanxue Yang, Xiuyun Lu, Aiyu Wang, Chao Xue, Ming Zhao and Jianhua Zhang
    Citation: BMC Microbiology 2023 23:41
  25. In contrast with macroorganisms, that show well-documented biogeographical patterns in distribution associated with local adaptation of physiology, behavior and life history, strong biogeographical patterns ha...

    Authors: H. Pieter J. van Veelen, Juan Diego Ibáñez-Álamo, Nicholas P. C. Horrocks, Arne Hegemann, Henry K. Ndithia, Mohammed Shobrak and B. Irene Tieleman
    Citation: BMC Microbiology 2023 23:40
  26. Probiotics are defined as live microbial food elements that are beneficial to human health. Lacticaseibacillus casei T1 was considered to have potential as a bioactive ingredient in functional foods, which was is...

    Authors: Zhihao Yu, Mei Cao, Jingshan Peng, Daoyan Wu, Shu Li, Chengmeng Wu, Liting Qing, Andong Zhang, Wenjie Wang, Min Huang and Jian Zhao
    Citation: BMC Microbiology 2023 23:39
  27. Microorganisms distribute and proliferate both inside and outside the body, which are the main mediators of decomposition after death. However, limited information is available on the postmortem microbiota cha...

    Authors: Ruina Liu, Kai Zhang, Huan Li, Qinru Sun, Xin Wei, Huiyu Li, Siruo Zhang, Shuanliang Fan and Zhenyuan Wang
    Citation: BMC Microbiology 2023 23:38
  28. The Bacillus cereus Sigma B (SigB) dependent general stress response is activated via the two-component RsbKY system, which involves a phosphate transfer from RsbK to RsbY. It has been hypothesized that the Hpr-l...

    Authors: Kah Yen Claire Yeak, Marcel Tempelaars, Jia Lun Wu, Wouter Westerveld, Alexander Reder, Stephan Michalik, Vishnu M. Dhople, Uwe Völker, Jan Pané-Farré, Marjon H. J. Wells-Bennik and Tjakko Abee
    Citation: BMC Microbiology 2023 23:37
  29. Streptococcus pneumoniae remains a leading cause of morbidity and mortality worldwide. In this study, we sought to analyze serotype distributions, antibiotic resistance, and genetic relationships of 106 clinical ...

    Authors: Sonia Ktari, Nourelhouda Ben Ayed, Imen Ben Rbeh, Nourhène Garbi, Sonda Maalej, Basma Mnif, Faouzia Rhimi and Adnene Hammami
    Citation: BMC Microbiology 2023 23:36
  30. Electronic cigarettes (ECs) have been widely used by young individuals in the U.S. while being considered less harmful than conventional tobacco cigarettes. However, ECs have increasingly been regarded as a he...

    Authors: Bongsoo Park, Hyunwook Koh, Michael Patatanian, Hermes Reyes-Caballero, Ni Zhao, Jill Meinert, Janet T. Holbrook, Leah I. Leinbach and Shyam Biswal
    Citation: BMC Microbiology 2023 23:35
  31. Gut microbiota is involved in the development of liver diseases such as fibrosis. We and others identified that selected sets of gut bacterial DNA and bacteria translocate to tissues, notably the liver, to est...

    Authors: Camille Champion, Radu M. Neagoe, Maria Effernberger, Daniela T. Sala, Florence Servant, Jeffrey E. Christensen, Maria Arnoriaga-Rodriguez, Jacques Amar, Benjamin Lelouvier, Pascale Loubieres, Vincent Azalbert, Matthieu Minty, Charlotte Thomas, Vincent Blasco-Baque, Fabrice Gamboa, Herbert Tilg…
    Citation: BMC Microbiology 2023 23:34
  32. Differences in the composition and diversity of the gut microbial communities among individuals are influenced by environmental factors. However, there is limited research on factors affecting microbiome varia...

    Authors: Tung Hoang, Minjung Kim, Ji Won Park, Seung-Yong Jeong, Jeeyoo Lee and Aesun Shin
    Citation: BMC Microbiology 2023 23:33

    The Correction to this article has been published in BMC Microbiology 2023 23:72

  33. Interactions between diet, stress and the gut microbiome are of interest as a means to modulate health and performance. Here, in vitro fermentation was used to explore the effects of a sudden change in diet, 2...

    Authors: Ida Gisela Pantoja-Feliciano, J. Philip Karl, Matthew Perisin, Laurel A. Doherty, Holly L. McClung, Nicholes J. Armstrong, Rebecca Renberg, Kenneth Racicot, Tobyn Branck, Steve Arcidiacono and Jason W. Soares
    Citation: BMC Microbiology 2023 23:32
  34. Great variation has been observed in the composition of the normal microbiota of the ocular surface, and therefore, in addition to differences in detection techniques, the method of collecting ocular surface s...

    Authors: Zhangling Chen, Zhaoyu Xiang, Lipu Cui, Xinran Qin, Shuli Chen, Huiyi Jin and Haidong Zou
    Citation: BMC Microbiology 2023 23:31
  35. Endophytic fungi of medicinal plants, as special microorganisms, are important sources of antibacterial compounds. However, the diversity and antibacterial activity of endophytic fungi from Pinellia Tenore have n...

    Authors: Kun Kong, Zhongdi Huang, Shuping Shi, Weidong Pan and Yinglao Zhang
    Citation: BMC Microbiology 2023 23:30
  36. Trametes gibbosa, which is a white-rot fungus of the Polyporaceae family found in the cold temperate zone, causes spongy white rot on wood. Laccase can oxidize benzene homologs and is one of the important oxidase...

    Authors: Jie Chen, Yi Ye, Yujie Chi, Xin Hao and Qingquan Zhao
    Citation: BMC Microbiology 2023 23:29
  37. Antimicrobial resistance has a direct impact on the ability to treat common infections, and this was worsened during the COVID-19 pandemic. Worldwide surveillance studies are lacking and resistance rates vary ...

    Authors: Ahmed M. Abdel Gawad, Walaa Mohamed Omar Ashry, Sherief El-Ghannam, Mahmoud Hussein and Ahmed Yousef
    Citation: BMC Microbiology 2023 23:28
  38. Listeria monocytogenes are Gram-positive rods, which are the etiological factor of listeriosis. L. monocytogenes quickly adapts to changing environmental conditions. Since the main source of rods is food, its eli...

    Authors: Natalia Wiktorczyk-Kapischke, Krzysztof Skowron, Ewa Wałecka-Zacharska, Katarzyna Grudlewska-Buda, Kacper Wnuk, Katarzyna Buszko and Eugenia Gospodarek-Komkowska
    Citation: BMC Microbiology 2023 23:27
  39. Malus sieversii (Ldb.) Roem. is the original species of modern cultivated apple and a key national essential conservation plant in China. In recent years, degradation and death of wild apple has been exacerbated ...

    Authors: Huiying Jiao, Liqiang Liu, Ruizhe Wang, Wei Qin and Bo Zhang
    Citation: BMC Microbiology 2023 23:26
  40. Typhoid fever is transmitted by ingestion of polluted water, contaminated food, and stool of typhoid-infected individuals, mostly in developing countries with poor hygienic environments. To find novel therapeu...

    Authors: Muneeba Afzal, Syed Shah Hassan, Saman Sohail, Ihosvany Camps, Yasmin Khan, Zarrin Basharat, Asad Karim, Muhammad Aurongzeb, Muhammad Irfan, Muhammad Salman and Carlos M. Morel
    Citation: BMC Microbiology 2023 23:25
  41. The emergence of multidrug-resistant Acinetobacter baumannii strains is increasing worldwide. To overcome these life-threatening infections, the development of new treatment approaches is critical. For this purpo...

    Authors: Maryam Pourhajibagher, Nava Hosseini and Abbas Bahador
    Citation: BMC Microbiology 2023 23:23
  42. Rifaximin has been increasingly applied in irritable bowel syndrome (IBS) treatment. Whether there were differences in the effects of rifaximin on microbiota from different intestinal segments, especially the ...

    Authors: Shengyan Zhang, Gaichao Hong, Gangping Li, Wei Qian, Yu Jin and Xiaohua Hou
    Citation: BMC Microbiology 2023 23:22
  43. Few studies have investigated the vaginal microbiota (VM) in women living with HIV (WLWH) in the context of high-risk human papillomavirus (HR-HPV) infection, even though WLWH are at an increased risk of HPV-r...

    Authors: Monserrat Chávez-Torres, Maria Gómez-Palacio-Schjetnan, Gustavo Reyes-Terán, Olivia Briceño, Santiago Ávila-Ríos, Karla Alejandra Romero-Mora and Sandra Pinto-Cardoso
    Citation: BMC Microbiology 2023 23:21
  44. The floc is a characteristic of microbial aggregate growth, displaying cloudy suspensions in water. Floc formation has been demonstrated in a series of bacteria and the floc-forming bacteria play a crucial rol...

    Authors: Ming Xia, Dianzhen Yu, Han Chen, Jingcheng Dai, Na Gao, Shuyang Li, Xuezhi Bi and Dongru Qiu
    Citation: BMC Microbiology 2023 23:20
  45. A. Baumannii is an opportunistic nosocomial pathogen which has severe antibiotic resistance. However, the epidemiology is less clearly understood in Jilin province and China. Thus, 89 A. baumannii isolates from a...

    Authors: Qingsong You, Xue Du, Nannan Hu, Yusi Zhang, Na Zhang, Fusheng Wang, Jinghua Li, Yanbo sun, Fang Wang and Hongyan Shi
    Citation: BMC Microbiology 2023 23:19
  46. The absorption and utilization of proteins by animals is affected by the amino acid (AA) release characteristics of their diets. In the present study, we aimed to determine the effects of diets with various am...

    Authors: Mengmeng Mi, Zhiwen Shen, Nianzhi Hu, Qiyu Zhang, Bin Wang, Li Pan, Guixin Qin, Nan Bao and Yuan Zhao
    Citation: BMC Microbiology 2023 23:18

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