Dye C, Scheele S, Dolin P, Pathania V, Raviglione MC: Consensus statement. Global burden of tuberculosis: estimated incidence, prevalence, and mortality by country. WHO Global Surveillance and Monitoring Project. JAMA. 1999, 282: 677-686. 10.1001/jama.282.7.677.
Article
CAS
PubMed
Google Scholar
Murray CJ, Salomon JA: Modeling the impact of global tuberculosis control strategies. Proc Natl Acad Sci USA. 1998, 95: 13881-13886. 10.1073/pnas.95.23.13881.
Article
PubMed Central
CAS
PubMed
Google Scholar
Schlesinger LS: Entry of Mycobacterium tuberculosis into Mononuclear Phagocytes. In: Tuberculosis Edited by Shinnick TM, vol. 215. pp. 71–96. Berlin: Springer-Verlag;. 1996, 71-96.
Google Scholar
Crowle AJ, Dahl R, Ross E, May MH: Evidence that vesicles containing living, virulent Mycobacterium tuberculosis or Mycobacterium avium in cultured human macrophages are not acidic. Infect Immun. 1991, 59: 1823-1831.
PubMed Central
CAS
PubMed
Google Scholar
Sturgill-Koszycki S, Schlesinger PH, Chakraborty P, Haddix PL, Collins HL, Fok AK, Allen RD, Gluck SL, Heuser J, Russell DG: Lack of acidification in Mycobacterium phagosomes produced by exclusion of the vesicular proton-ATPase. Science. 1994, 263: 678-681.
Article
CAS
PubMed
Google Scholar
Oh YK, Straubinger RM: Intracellular fate of Mycobacterium avium: use of dual-label spectrofluorometry to investigate the influence of bacterial viability and opsonization on phagosomal pH and phagosome-lysosome interaction. Infect Immun. 1996, 64: 319-325.
PubMed Central
CAS
PubMed
Google Scholar
Armstrong JA, D'Arcy Hart P: Response of cultured macrophages to Mycobacterium tuberculosis, with observations on fusion of lysosomes with phagosomes. J Exp Med. 1971, 134: 713-740.
Article
PubMed Central
CAS
PubMed
Google Scholar
Sturgill-Koszycki S, Schaible UE, Russell DG: Mycobacterium-containing phagosomes are accessible to early endosomes and reflect a transitional state in normal phagosome biogenesis. Embo J. 1996, 15: 6960-8.
PubMed Central
CAS
PubMed
Google Scholar
Clemens DL, Horwitz MA: Characterization of the Mycobacterium tuberculosis phagosome and evidence that phagosomal maturation is inhibited. J Exp Med. 1995, 181: 257-270.
Article
CAS
PubMed
Google Scholar
Clemens DL, Lee BY, Horwitz MA: Deviant expression of Rab5 on phagosomes containing the intracellular pathogens Mycobacterium tuberculosis and Legionella pneumophila is associated with altered phagosomal fate. Infect Immun. 2000, 68: 2671-2684. 10.1128/IAI.68.5.2671-2684.2000.
Article
PubMed Central
CAS
PubMed
Google Scholar
Deretic V, Via LE, Fratti RA, Deretic D: Mycobacterial phagosome maturation, rab proteins, and intracellular trafficking. Electrophoresis. 1997, 18: 2542-2547.
Article
CAS
PubMed
Google Scholar
Isberg RR, Falkow S: A single genetic locus encoded by Yersinia pseudotuberculosis permits invasion of cultured animal cells by Escherichia coli K-12. Nature. 1985, 317: 262-264.
Article
CAS
PubMed
Google Scholar
Arruda S, Bomfim G, Knights R, Huima-Byron T, Riley LW: Cloning of an M. tuberculosis DNA fragment associated with entry and survival inside cells. Science. 1993, 261: 1454-1457.
Article
CAS
PubMed
Google Scholar
Mundayoor S, Shinnick TM: Identification of genes involved in the resistance of mycobacteria to killing by macrophages. Annals NY Acad Sci. 1994, 730: 26-36.
Article
CAS
Google Scholar
Wei J, Dahl JL, Moulder JW, Roberts EA, O'Gaora P, Young DB, Friedman RL: Identification of a Mycobacterium tuberculosis gene that enhances mycobacterial survival in macrophages. J Bacteriol. 2000, 182: 377-384. 10.1128/JB.182.2.377-384.2000.
Article
PubMed Central
CAS
PubMed
Google Scholar
Zhang Y, Heym B, Allen B, Young D, Cole S: The catalase-peroxidase gene and isoniazid resistance of Mycobacterium tuberculosis. Nature. 1992, 358: 591-593. 10.1038/358591a0.
Article
CAS
PubMed
Google Scholar
Garbe T, Harris D, Vordermeier M, Lathigra R, Ivanyi J, Young D: Expression of the Mycobacterium tuberculosis 19-kilodalton antigen in Mycobacterium smegmatis. immunological analysis and evidence of glycosylation. Infect Immun. 1993, 61: 260-267.
PubMed Central
CAS
PubMed
Google Scholar
Harth G, Horwitz MA: Expression and efficient export of enzymatically active Mycobacterium tuberculosis glutamine synthetase in Mycobacterium smegmatis and evidence that the information for export is contained within the protein. J Biol Chem. 1997, 272: 22728-22735. 10.1074/jbc.272.36.22728.
Article
CAS
PubMed
Google Scholar
Dahl JL, Wei J, Moulder JW, Laal S, Friedman RL: Subcellular localization of the intracellular survival-enhancing Eis protein of Mycobacterium tuberculosis. Infect Immun. 2001, 69: 4295-4302. 10.1128/IAI.69.7.4295-4302.2001.
Article
PubMed Central
CAS
PubMed
Google Scholar
Pascopella L, Collins FM, Martin JM, Lee MH, Hatfull GF, Stover CK, Bloom BR, Jacobs WR: Use of in vivo complementation in Mycobacterium tuberculosis to identify a genomic fragment associated with virulence. Infect Immun. 1994, 62: 1313-1319.
PubMed Central
CAS
PubMed
Google Scholar
Asseffa A, Dickson LA, Mohla S, Bremner TA: Phorbol myristate acetate-differentiated THP-1 cells display increased levels of MHC class I and class II mRNA and interferon-gamma-inducible tumoricidal activity. Oncology Res. 1993, 5: 11-18.
CAS
Google Scholar
Miller BH, Shinnick TM: Evaluation of Mycobacterium tuberculosis genes involved in resistance to killing by human macrophages. Infect Immun. 2000, 68: 387-390.
Article
PubMed Central
CAS
PubMed
Google Scholar
Cole ST, Brosch R, Parkhill J, Garnier T, Churcher C, Harris D, Gordon SV, Eiglmeier K, Gas S, Barry CE, Tekaia F, Badcock K, Basham D, Brown D, Chillingworth T, Connor R, Davies R, Devlin K, Feltwell T, Gentles S, Hamlin N, Holroyd S, Hornsby T, Jagels K, Barrell BG: Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature. 1998, 393: 537-544. 10.1038/31159.
Article
CAS
PubMed
Google Scholar
Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor: Cold Spring Harbor Laboratory Press;. 1989
Google Scholar
Cole ST, Eiglmeier K, Parkhill J, James KD, Thomson NR, Wheeler PR, Honore N, Garnier T, Churcher C, Harris D, Mungall K, Basham D, Brown D, Chillingworth T, Connor R, Davies RM, Devlin K, Duthoy S, Feltwell T, Fraser A, Hamlin N, Holroyd S, Hornsby T, Jagels K, Lacroix C, Maclean J, Moule S, Murphy L, Oliver K, Quail MA, Rajandream MA, Rutherford KM, Rutter S, Seeger K, Simon S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Taylor K, Whitehead S, Woodward JR, Barrell BG: Massive gene decay in the leprosy bacillus. Nature. 2001, 409: 1007-1011. 10.1038/35059006.
Article
CAS
PubMed
Google Scholar
Zhu Z, Yao J, Johns T, Fu K, De Bie I, Macmillan C, Cuthbert AP, Newbold RF, Wang J, Chevrette M, Brown GK, Brown RM, Shoubridge EA: SURFl, encoding a factor involved in the biogenesis of cytochrome c oxidase, is mutated in Leigh syndrome. Nat Genet. 1998, 20: 337-343. 10.1038/3804.
Article
CAS
PubMed
Google Scholar
Nierman WC, Feldblyum TV, Laub MT, Paulsen IT, Nelson KE, Eisen J, Heidelberg JF, Alley MR, Ohta N, Maddock JR, Potocka I, Nelson WC, Newton A, Stephens C, Phadke ND, Ely B, DeBoy RT, Dodson RJ, Durkin AS, Gwinn ML, Haft DH, Kolonay JF, Smit J, Craven MB, Khouri H, Shetty J, Berry K, Utterback T, Tran K, Wolf A, Vamathevan J, Ermolaeva M, White 0, Salzberg SL, Venter JC, Shapiro L, Fraser CM: Complete genome sequence of Caulobacter crescentus. Proc Natl Acad Sci USA. 2001, 98: 4136-4141. 10.1073/pnas.061029298.
Article
PubMed Central
CAS
PubMed
Google Scholar
Nijtmans LG, Artal Sanz M, Bucko M, Farhoud MH, Feenstra M, Hakkaart GA, Zeviani M, Grivell LA: Shy1p occurs in a high molecular weight complex and is required for efficient assembly of cytochrome c oxidase in yeast. FEBS Lett. 2001, 498: 46-51. 10.1016/S0014-5793(01)02447-4.
Article
CAS
PubMed
Google Scholar
Wieles B, Ottenhoff TH, Steenwijk TM, Franken KL, de Vries RR, Langermans JA: Increased intracellular survival of Mycobacterium smegmatis containing the Mycobacterium leprae thioredoxin-thioredoxin reductase gene. Infect Immun. 1997, 65: 2537-2541.
PubMed Central
CAS
PubMed
Google Scholar
Lagier B, Pelicic V, Lecossier D, Prod'hom G, Rauzier J, Guilhot C, Gicquel B, Hance AJ: Identification of genetic loci implicated in the survival of Mycobacterium smegmatis in human mononuclear phagocytes. Mol Microbiol. 1998, 29: 465-475. 10.1046/j.1365-2958.1998.00933.x.
Article
CAS
PubMed
Google Scholar
Plikaytis BB, Crawford JT, Shinnick TM: IS1549 from Mycobacterium smegmatis forms long direct repeats upon insertion. J Bacteriol. 1998, 180: 1037-1043.
PubMed Central
CAS
PubMed
Google Scholar
Kenney TJ, Churchward G: Genetic analysis of the Mycobacterium smegmatis rpsL promoter. J Bacteriol. 1996, 178: 3564-3571.
PubMed Central
CAS
PubMed
Google Scholar
Wilson K: Preparation of genomic DNA from bacteria. In: Current Protocols in Molecular Biology Edited by Ausubel F, Brent R, Kinston R, Moore D, Seidman I, Smith J, Struhl K, vol. 1. pp. 2.4.1–2.4.2. New York: Wiley Interscience;. 1990, 2.4.1-2.4.2.
Google Scholar
Jacobs WR, Kalpana GV, Cirillo JD, Pascopella L, Snapper SB, Udani RA, Jones W, Barletta RG, Bloom BR: Genetic systems for mycobacteria. Methods Enzymol. 1991, 204: 537-555.
Article
CAS
PubMed
Google Scholar
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol. 1990, 215: 403-410. 10.1006/jmbi.1990.9999.
Article
CAS
PubMed
Google Scholar
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25: 3389-3402. 10.1093/nar/25.17.3389.
Article
PubMed Central
CAS
PubMed
Google Scholar
Schaffer AA, Aravind L, Madden TL, Shavirin S, Spouge JL, Wolf YI, Koonin EV, Altschul SF: Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements. Nucleic Acids Res. 2001, 29: 2994-3005. 10.1093/nar/29.14.2994.
Article
PubMed Central
CAS
PubMed
Google Scholar
Schultz J, Milpetz F, Bork P, Ponting CP: SMART, a simple modular architecture research tool: identification of signaling domains. Proc Natl Acad Sci USA. 1998, 95: 5857-5864. 10.1073/pnas.95.11.5857.
Article
PubMed Central
CAS
PubMed
Google Scholar
Schultz J, Copley RR, Doerks T, Ponting CP, Bork P: SMART: a web-based tool for the study of genetically mobile domains. Nucleic Acids Res. 2000, 28: 231-234. 10.1093/nar/28.1.231.
Article
PubMed Central
CAS
PubMed
Google Scholar
Miller LP, Crawford JT, Shinnick TM: The rpo B Gene of Mycobacterium tuberculosis. Antimicrob Agents Chemoth. 1994, 38: 805-811.
Article
CAS
Google Scholar