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  1. Viability staining with SYTO9 and propidium iodide (PI) is a frequently used tool in microbiological studies. However, data generated by such routinely used method are often not critically evaluated for their ...

    Authors: Philipp Stiefel, Sabrina Schmidt-Emrich, Katharina Maniura-Weber and Qun Ren
    Citation: BMC Microbiology 2015 15:36
  2. Tubulin cofactor A (TBCA), one of the members of tubulin cofactors, is of great importance in microtubule functions through participating in the folding of α/β-tubulin heterodimers in Saccharomyces cerevisiae. Ho...

    Authors: Xiaoping Zhang, Xiang Chen, Jinhua Jiang, Menghao Yu, Yanni Yin and Zhonghua Ma
    Citation: BMC Microbiology 2015 15:35
  3. Bacteria use alternative sigma factors (σs) to regulate condition-specific gene expression for survival and Shewanella harbors multiple ECF (extracytoplasmic function) σ genes and cognate anti-sigma factor genes....

    Authors: Jingcheng Dai, Hehong Wei, Chunyuan Tian, Fredrick Heath Damron, Jizhong Zhou and Dongru Qiu
    Citation: BMC Microbiology 2015 15:34
  4. Microorganisms of different species interact in several ecological niches, even causing infection. During the infectious process, a biofilm of single or multispecies can develop. Aspergillus fumigatus and Staphyl...

    Authors: Adrián Ramírez Granillo, María Gabriela Medina Canales, María Esther Sánchez Espíndola, María Angeles Martínez Rivera, Victor Manuel Bautista de Lucio and Aída Verónica Rodríguez Tovar
    Citation: BMC Microbiology 2015 15:33
  5. Tight junctions (TJs) maintain the intestinal mucosal barrier, dysfunction of which plays a vital role in the pathophysiology of a variety of gastrointestinal disorders. Previously, we have shown that L. reuteri ...

    Authors: Fengjuan Yang, Aina Wang, Xiangfang Zeng, Chengli Hou, Hong Liu and Shiyan Qiao
    Citation: BMC Microbiology 2015 15:32
  6. A previous study identified a Yersinia enterocolitica transposon mutant, GY448, that was unable to export the flagellar type three secretion system (T3SS)-dependent phospholipase, YplA. This strain was also defic...

    Authors: Karen LeGrand, Shane Petersen, Yan Zheng, Kang K Liu, Gulustan Ozturk, Jing-Yu Chen and Glenn M Young
    Citation: BMC Microbiology 2015 15:31
  7. Light, oxygen, voltage (LOV) domains are widely distributed in plants, algae, fungi, bacteria, and represent the photo-responsive domains of various blue-light photoreceptor proteins. Their photocycle involves...

    Authors: Stephan Endres, Joachim Granzin, Franco Circolone, Andreas Stadler, Ulrich Krauss, Thomas Drepper, Vera Svensson, Esther Knieps-Grünhagen, Astrid Wirtz, Anneliese Cousin, Petra Tielen, Dieter Willbold, Karl-Erich Jaeger and Renu Batra-Safferling
    Citation: BMC Microbiology 2015 15:30
  8. Lipopeptides (LP) are structurally diverse compounds with potent surfactant and broad-spectrum antibiotic activities. In Pseudomonas and other bacterial genera, LP biosynthesis is governed by large multimodular n...

    Authors: Chunxu Song, Gustav Sundqvist, Erik Malm, Irene de Bruijn, Aundy Kumar, Judith van de Mortel, Vincent Bulone and Jos M Raaijmakers
    Citation: BMC Microbiology 2015 15:29
  9. Dietary protein plays a major role in ruminant nutrition, and protein supplementation is a widespread practice among farmers in the tropics. Ruminal bacteria are the main agents of dietary protein and amino ac...

    Authors: Cláudia Braga Pereira Bento, Analice Cláudia de Azevedo, Edenio Detmann and Hilário Cuquetto Mantovani
    Citation: BMC Microbiology 2015 15:28
  10. To date, biologists have discovered a large amount of valuable information from assembled genomes, but the abundant microbial data that is hidden in the raw genomic sequence data of plants and animals is usual...

    Authors: Li-Hua Niu, Xiu-Feng Song, Shun-Min He, Peng Zhang, Ning-Xin Wang, Yi Li and Da-Wei Huang
    Citation: BMC Microbiology 2015 15:27
  11. Staphylococcus epidermidis and S. aureus have been identified as the most common bacteria responsible for sub-clinical and overt breast implant infections and their ability to form biofilm on t...

    Authors: Ramona Barbieri, Marianna Pesce, Simonetta Franchelli, Ilaria Baldelli, Andrea De Maria and Anna Marchese
    Citation: BMC Microbiology 2015 15:26
  12. Agrobacterium sp. ATCC31749 is an efficient curdlan producer at low pH and under nitrogen starvation. The helix-turn-helix transcriptional regulatory protein (crdR) essential for curdlan produc...

    Authors: Xiaoqin Yu, Chao Zhang, Liping Yang, Lamei Zhao, Chun Lin, Zhengjie Liu and Zichao Mao
    Citation: BMC Microbiology 2015 15:25
  13. Maternal or uniparental inheritance (UPI) of mitochondria is generally observed in sexual eukaryotes, however, the underlying mechanisms are diverse and largely unknown. Recently, based on the use of mutants b...

    Authors: Gaby Wagner-Vogel, Frauke Lämmer, Jörg Kämper and Christoph W Basse
    Citation: BMC Microbiology 2015 15:23
  14. Molybdopterin cofactor (MoCo) biosynthesis in Mycobacterium tuberculosis is associated with a multiplicity of genes encoding several enzymes in the pathway, including the molybdopterin (MPT) synthase, a hetero te...

    Authors: Nicole C Narrandes, Edith Erika Machowski, Valerie Mizrahi and Bavesh D Kana
    Citation: BMC Microbiology 2015 15:22
  15. Plant growth-promoting rhizobacteria (PGPR) are soil beneficial microorganisms that colonize plant roots for nutritional purposes and accordingly benefit plants by increasing plant growth or reducing disease. ...

    Authors: Shanshan Xie, Huijun Wu, Lina Chen, Haoyu Zang, Yongli Xie and Xuewen Gao
    Citation: BMC Microbiology 2015 15:21
  16. Powdery mildew diseases are a major phytosanitary issue causing important yield and economic losses in agronomic, horticultural and ornamental crops. Powdery mildew fungi are obligate biotrophic parasites unab...

    Authors: David Vela-Corcía, Diego Romero, Juan Antonio Torés, Antonio De Vicente and Alejandro Pérez-García
    Citation: BMC Microbiology 2015 15:20
  17. Downy mildew, a plant disease caused by the oomycete Bremia lactucae, is endemic in many lettuce-growing regions of the world. Invasion by plant pathogens may create new portals and opportunities for microbial co...

    Authors: Ivan Simko, Yaguang Zhou and Maria T Brandl
    Citation: BMC Microbiology 2015 15:19
  18. The aim of this study was to analyze the effect of ciprofloxacin at different times on the development and behavior of intrinsic autofluorescence, covered area, thickness and cell viability in a biofilm formed...

    Authors: María-Carmen Muñoz-Egea, María García-Pedrazuela, Ignacio Mahillo and Jaime Esteban
    Citation: BMC Microbiology 2015 15:18
  19. The combination of imaging technologies and luciferase-based bioluminescent bacterial reporter strains provide a sensitive and simple non-invasive detection method (photonic bioimaging) for the study of divers...

    Authors: Steven T Bruckbauer, Brian H Kvitko, RoxAnn R Karkhoff-Schweizer and Herbert P Schweizer
    Citation: BMC Microbiology 2015 15:17
  20. Legumes establish with rhizobial bacteria a nitrogen-fixing symbiosis which is of the utmost importance for both plant nutrition and a sustainable agriculture. Calcium is known to act as a key intracellular me...

    Authors: Roberto Moscatiello, Mattia Zaccarin, Flavia Ercolin, Ernesto Damiani, Andrea Squartini, Antonella Roveri and Lorella Navazio
    Citation: BMC Microbiology 2015 15:16
  21. Surgical-site infection is the most frequent health care-associated infection in the developing world, with a strikingly higher prevalence than in developed countries We studied the prevalence of resistance to...

    Authors: Clotaire Rafaï, Thierry Frank, Alexandre Manirakiza, Alfred Gaudeuille, Jean-Robert Mbecko, Luc Nghario, Eugene Serdouma, Bertrand Tekpa, Benoit Garin and Sebastien Breurec
    Citation: BMC Microbiology 2015 15:15
  22. The Escherichia coli enzyme tryptophanase (TnaA) converts tryptophan to indole, which triggers physiological changes and regulates interactions between bacteria and their mammalian hosts. Tryptophanase production...

    Authors: Gang Li and Kevin D Young
    Citation: BMC Microbiology 2015 15:14
  23. The Bacillus subtilis Zur transcription factor recognizes a specific DNA motif, the Zur box, to repress expression of genes in response to zinc availability. Although several Zur-regulated genes are well characte...

    Authors: Eric Prestel, Philippe Noirot and Sandrine Auger
    Citation: BMC Microbiology 2015 15:13
  24. Participation of renal cells in the pathogenesis of staphylococcal enterotoxin B (SEB) is critical for late cleansing and sequestration of the antigens facilitated by CD1d mediated antigen sensing and recognit...

    Authors: Rasha Hammamieh, Nabarun Chakraborty, Yixin Lin, Jeffrey W Shupp, Stacy-Ann Miller, Sam Morris and Marti Jett
    Citation: BMC Microbiology 2015 15:12
  25. Fungi contaminate the food of humans and animals, are a risk to health, and can cause financial losses. In this work, the antifungal activities of 16 mesoionic compounds (MI 1–16) were evaluated against mycotoxig...

    Authors: Rojane de Oliveira Paiva, Lucimar Ferreira Kneipp, Camilla Moretto dos Reis and Aurea Echevarria
    Citation: BMC Microbiology 2015 15:11
  26. The editors of BMC Microbiology would like to thank all our reviewers who have contributed to the journal in Volume 14 (2014).

    Authors: Philippa K Harris
    Citation: BMC Microbiology 2015 15:10
  27. Iron is an essential micronutrient for all living organisms, and virulence and sequestration of iron in pathogenic bacteria are believed to be correlated. As a defence mechanism, potential hosts therefore keep...

    Authors: Sunniva Katharina Thode, Tim Kahlke, Espen Mikal Robertsen, Hilde Hansen and Peik Haugen
    Citation: BMC Microbiology 2015 15:9
  28. The bacterial cell surface is a crucial factor in cell-cell and cell-host interactions. Lactobacillus johnsonii FI9785 produces an exopolysaccharide (EPS) layer whose quantity and composition is altered in mutant...

    Authors: Enes Dertli, Melinda J Mayer and Arjan Narbad
    Citation: BMC Microbiology 2015 15:8
  29. Clostridium difficile toxins A and B (TcdA and TcdB), considered to be essential for C. difficile infection, affect the morphology of several cell types with different potencies and timing. How...

    Authors: Kevin M D’Auria, Meghan J Bloom, Yesenia Reyes, Mary C Gray, Edward J van Opstal, Jason A Papin and Erik L Hewlett
    Citation: BMC Microbiology 2015 15:7
  30. Haemophilus influenzae is one of the main pathogens that cause community-acquired respiratory infections in children. Our previous study showed that H. influenzae is the second most common path...

    Authors: Hongbin Zhu, Aihua Wang, Jingjing Tong, Lin Yuan, Wei Gao, Wei Shi, Sangjie Yu, Kaihu Yao and Yonghong Yang
    Citation: BMC Microbiology 2015 15:6
  31. The fungus Pochonia chlamydosporia parasitizes nematode eggs and has become one of the most promising biological control agents (BCAs) for plant-parasitic nematodes, which are major agricultural pests that cause ...

    Authors: Runmao Lin, Chichuan Liu, Baoming Shen, Miao Bai, Jian Ling, Guohua Chen, Zhenchuan Mao, Xinyue Cheng and Bingyan Xie
    Citation: BMC Microbiology 2015 15:5
  32. For a good probiotic candidate, the abilities to adhere to intestinal epithelium and to fortify barrier function are considered to be crucial for colonization and functionality of the strain. The strain Lactobaci...

    Authors: Veera Kainulainen, Yurui Tang, Thomas Spillmann, Susanne Kilpinen, Justus Reunanen, Per EJ Saris and Reetta Satokari
    Citation: BMC Microbiology 2015 15:4
  33. Bifidobacteria is one of the major gut commensal groups found in infants. Their colonization is commonly associated with beneficial effects to the host through mechanisms like niche occupation and nutrient com...

    Authors: Pamela Vazquez-Gutierrez, Christophe Lacroix, Tanja Jaeggi, Christophe Zeder, Michael Bruce Zimmerman and Christophe Chassard
    Citation: BMC Microbiology 2015 15:3
  34. The proteins Sm1 and Sm2 from the biocontrol fungus Trichoderma virens belong to the cerato-platanin protein family. Members of this family are small, secreted proteins that are abundantly produced by filamentous...

    Authors: Romana Gaderer, Netta L Lamdan, Alexa Frischmann, Michael Sulyok, Rudolf Krska, Benjamin A Horwitz and Verena Seidl-Seiboth
    Citation: BMC Microbiology 2015 15:2
  35. Streptococcus mutans is known as a key causative agent of dental caries. It metabolizes dietary carbohydrate to produce acids which reduce the environmental pH leading to tooth demineralization...

    Authors: Sadaf Hasan, Mohd Danishuddin and Asad U Khan
    Citation: BMC Microbiology 2015 15:1
  36. Francisella tularensis is a Gram-negative bacterium that infects hundreds of species including humans, and has evolved to grow efficiently within a plethora of cell types. RipA is a conserved membrane protein of...

    Authors: Cheryl N Miller, Shaun P Steele, Jason C Brunton, Ronald J Jenkins, Eric D LoVullo, Sharon A Taft-Benz, Artur Romanchuk, Corbin D Jones, Garry D Dotson, Edward J Collins and Thomas H Kawula
    Citation: BMC Microbiology 2014 14:336
  37. Non-typeable H. influenzae (NTHi) is a nasopharyngeal commensal that can become an opportunistic pathogen causing infections such as otitis media, pneumonia, and bronchitis. NTHi is known to form biofilms. Resist...

    Authors: Deborah MB Post, Jason M Held, Margaret R Ketterer, Nancy J Phillips, Alexandria Sahu, Michael A Apicella and Bradford W Gibson
    Citation: BMC Microbiology 2014 14:329
  38. The disruption of the bacterial cell wall plays an important part in achieving quantitative extraction of DNA from Eubacteria essential for accurate analyses of genetic material recovered from environmental sa...

    Authors: Peter Irwin, Ly Nguyen, Yiping He, George Paoli, Andrew Gehring and Chin-Yi Chen
    Citation: BMC Microbiology 2014 14:326
  39. The very-preterm infant gut microbiota is increasingly explored due to its probable role in the development of life threatening diseases. Results of high-throughput studies validate and renew the interest in a...

    Authors: Fabien Aujoulat, Laurent Roudière, Jean-Charles Picaud, Aurélien Jacquot, Anne Filleron, Dorine Neveu, Thierry-Pascal Baum, Hélène Marchandin and Estelle Jumas-Bilak
    Citation: BMC Microbiology 2014 14:325
  40. The microbiological procedures for cystic fibrosis (CF) samples of 17 participating Spanish centers were examined to verify their compliance with current international and national guidelines and to implement ...

    Authors: Juan de Dios Caballero, Rosa del Campo, Marta Tato, Elia Gómez G de la Pedrosa, Marta Cobo, Carla López-Causapé, Enrique Gómez-Mampaso, Antonio Oliver and Rafael Cantón
    Citation: BMC Microbiology 2014 14:335
  41. Despite all the benefits assigned to the genetically modified plants, there are still no sufficient data available in literature concerning the possible effects on the microbial communities associated with the...

    Authors: Débora Alves Ferreira da Silva, Simone Raposo Cotta, Renata Estebanez Vollú, Diogo de Azevedo Jurelevicius, Joana Montezano Marques, Ivanildo Evódio Marriel and Lucy Seldin
    Citation: BMC Microbiology 2014 14:332
  42. Human T-lymphotropic virus 1 (HTLV-1) has been associated with leukemia/lymphoma (ATL) and myelopathy/tropical spastic paraparesis (HAM/TSP), in addition to other inflammatory diseases as well as infection com...

    Authors: Camila Pacheco Silveira Martins, Orlando Abreu Gomes, Marina Lobato Martins, Luciana Debortoli de Carvalho, Jaqueline Gontijo de Souza, Flavio Guimaraes Da Fonseca, Rodrigo Gonçalves Silva dos Santos, Margareth Spangler Andrade, Carlos Leomar Zani, Elaine Maria de Souza-Fagundes and Edel Figueiredo Barbosa-Stancioli
    Citation: BMC Microbiology 2014 14:331
  43. The human pathogen Vibrio cholerae normally enters the developmental program of natural competence for transformation after colonizing chitinous surfaces. Natural competence is regulated by at least three pathway...

    Authors: Mirella Lo Scrudato, Sandrine Borgeaud and Melanie Blokesch
    Citation: BMC Microbiology 2014 14:327
  44. Motility of flagellated bacteria depends crucially on their organelles such as flagella and pili, as well as physical properties of the external medium, such as viscosity and matrix elasticity. We studied the ...

    Authors: Yukun Gao, Marianna Neubauer, Alexander Yang, Nathan Johnson, Michael Morse, Guanglai Li and Jay X Tang
    Citation: BMC Microbiology 2014 14:322
  45. Mesorhizobium alhagi CCNWXJ12-2 is a α-proteobacterium which could be able to fix nitrogen in the nodules formed with Alhagi sparsifolia in northwest of China. Desiccation and high salinity are the two major env...

    Authors: Xiaodong Liu, Yantao Luo, Osama Abdalla Mohamed, Dongying Liu and Gehong Wei
    Citation: BMC Microbiology 2014 14:319
  46. Special features of the Japanese ocean include its ranges of latitude and depth. This study is the first to examine the diversity of Class I and II PHA synthases (PhaC) in DNA samples from pelagic seawater tak...

    Authors: Choon Pin Foong, Nyok-Sean Lau, Shigeru Deguchi, Takashi Toyofuku, Todd D Taylor, Kumar Sudesh and Minami Matsui
    Citation: BMC Microbiology 2014 14:318
  47. Pathogenic chlamydiae are obligate intracellular pathogens and have adapted successfully to human cells, causing sexually transmitted diseases or pneumonia. Chlamydial outer protein N (CopN) is likely a critic...

    Authors: Kasumi Ishida, Junji Matsuo, Yoshimasa Yamamoto and Hiroyuki Yamaguchi
    Citation: BMC Microbiology 2014 14:330
  48. Klebsiella pneumoniae has emerged worldwide as a cause of pyogenic liver abscess (PLA) often complicated by meningitis and endophthalmitis. Early detection of this infectious disease will improve its clinical ou...

    Authors: Tzu-Lung Lin, Yi-Ping Chuang, Yu-Tsung Huang, Pei-Fang Hsieh, Yi-Tsung Lin and Jin-Town Wang
    Citation: BMC Microbiology 2014 14:321

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