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  1. To explore the inhibition mechanism of Saccharomyces boulardii (S. boulardii) on ulcerative colitis (UC) carcinogenesis.

    Authors: Chunsaier Wang, Wenbin Li, Hongying Wang, Yiming Ma, Xinhua Zhao, Xudong Zhang, Hong Yang, Jiaming Qian and Jingnan Li
    Citation: BMC Microbiology 2019 19:246
  2. In light of rampant childhood diarrhoea, this study investigated bacterial pathogens from human and non-human sources in an urban informal settlement.

    Authors: John Bosco Kalule, Anthony M. Smith, Mjikisile Vulindhlu, Nomsa P. Tau, Mark P. Nicol, Karen H. Keddy and Lourens Robberts
    Citation: BMC Microbiology 2019 19:244
  3. Cryptococcus neoformans, a basidiomycetous yeast, is a fungal pathogen that can colonize the lungs of humans causing pneumonia and fungal meningitis in severely immunocompromised individuals. Recent studies have ...

    Authors: Nadir Hani Dbouk, Madison Bailey Covington, Kenny Nguyen and Srikripa Chandrasekaran
    Citation: BMC Microbiology 2019 19:243
  4. Mycoplasma hyorhinis (Mhr) is the etiologic agent of lameness and polyserositis in swine. P37 is a membrane protein of Mhr that may be an important immunogen and is a potential target for diagnostic development. ...

    Authors: Hongzhen Zhu, Yanwu Wei, Liping Huang, Dan Liu, Yongxing Xie, Deli Xia, Haiqiao Bian, Li Feng and Changming Liu
    Citation: BMC Microbiology 2019 19:242
  5. Acinetobacter baumannii is one of the most important opportunistic pathogens responsible for hospital acquired infections. It displays multi-drug resistance profile and has the ability to colonize surfaces and pe...

    Authors: Renatas Krasauskas, Jūratė Skerniškytė, Julija Armalytė and Edita Sužiedėlienė
    Citation: BMC Microbiology 2019 19:241
  6. Detection of ceftazidime/avibactam (CAZ/AVI) antibacterial activity is absolutely vital with the rapid growth of carbapenem resistant Enterobacteriaceae (CRE). But now, there is no available automated antimicrobi...

    Authors: Xianggui Yang, Dan Wang, Qin Zhou, Fang Nie, Hongfei Du, Xueli Pang, Yingzi Fan, Tingting Bai and Ying Xu
    Citation: BMC Microbiology 2019 19:240
  7. The human small intestine plays a central role in the processes of digestion and nutrient absorption. However, characterizations of the human gut microbiome have largely relied on stool samples, and the associ...

    Authors: Gabriela Guimaraes Sousa Leite, Walter Morales, Stacy Weitsman, Shreya Celly, Gonzalo Parodi, Ruchi Mathur, Rashin Sedighi, Gillian M. Barlow, Ali Rezaie and Mark Pimentel
    Citation: BMC Microbiology 2019 19:239
  8. Diet is a major determinant of bacterial community structure in termite guts, but evidence of its importance in the closely related cockroaches is conflicting. Here, we investigated the ecological drivers of t...

    Authors: Niclas Lampert, Aram Mikaelyan and Andreas Brune
    Citation: BMC Microbiology 2019 19:238
  9. To evaluate the antibiotic resistance patterns of uropathogens isolated from adult women with acute community-acquired (CA) uncomplicated cystitis.

    Authors: Jamaan Al-Zahrani, Khaled Al Dossari, Ahmed H. Gabr, Abul-fotouh Ahmed, Saad Abdulrahman Al Shahrani and Sameer Al-Ghamdi
    Citation: BMC Microbiology 2019 19:237
  10. Human gut microbiota are important for human health and have been regarded as a “forgotten organ”, whose variation is closely linked with various factors, such as host genetics, diet, pathological conditions a...

    Authors: Congmin Xu, Huaiqiu Zhu and Peng Qiu
    Citation: BMC Microbiology 2019 19:236

    The Correction to this article has been published in BMC Microbiology 2021 21:129

  11. Porcine enzootic pneumonia is a worldwide problem in swine production. The infected host demonstrates a respiratory disease whose etiologic agent is Mycoplasma hyopneumoniae (Mhp). A total of 266 lung samples wit...

    Authors: Viviane Sisdelli Assao, Thalita Moreira Scatamburlo, Elaine Nery Araujo, Marcus Rebouças Santos, Carlos Eduardo Real Pereira, Roberto Maurício Carvalho Guedes, Gustavo Costa Bressan, Juliana Lopes Rangel Fietto, Yung-Fu Chang, Maria Aparecida Scatamburlo Moreira and Abelardo Silva-Júnior
    Citation: BMC Microbiology 2019 19:234

    The Correction to this article has been published in BMC Microbiology 2019 19:258

  12. Streptomyces lividans is an appealing host for the production of proteins of biotechnological interest due to its relaxed exogenous DNA restriction system and its ability to secrete proteins directly to the mediu...

    Authors: Jósé R. Valverde, Sonia Gullón, Clara A. García-Herrero, Iván Campoy and Rafael P. Mellado
    Citation: BMC Microbiology 2019 19:233
  13. Co-translational processes in bacteria are attractive drug targets, but while some processes are essential, others are not. The essentiality of Peptide Deformylase (PDF, def) for vitality of mycobacteria was spec...

    Authors: Noga Naor, Omer Gadot, Michal Meir and Daniel Barkan
    Citation: BMC Microbiology 2019 19:232
  14. Phenylalanine ammonia-lyase (PAL, EC 4.3.1.24) is the first key enzyme in the phenylpropanoid pathway. The pal gene has been widely studied in plants and participates in plant growth, development and defense syst...

    Authors: Ludan Hou, Lining Wang, Xiangli Wu, Wei Gao, Jinxia Zhang and Chenyang Huang
    Citation: BMC Microbiology 2019 19:231
  15. The gut microbiota composition is known to be influenced by a myriad of factors including the host genetic profile and a number of environmental influences. Here, we focus on the environmental influence of coh...

    Authors: Casey T. Finnicum, Jeffrey J. Beck, Conor V. Dolan, Christel Davis, Gonneke Willemsen, Erik A. Ehli, Dorret I. Boomsma, Gareth E. Davies and Eco J. C. de Geus
    Citation: BMC Microbiology 2019 19:230
  16. The gut bacteria of tephritid fruit flies play prominent roles in nutrition, reproduction, maintenance and ecological adaptations of the host. Here, we adopted an approach based on direct observation of symbio...

    Authors: Mazarin Akami, Xue-Ming Ren, Xuewei Qi, Abdelaziz Mansour, Bingli Gao, Shuai Cao and Chang-Ying Niu
    Citation: BMC Microbiology 2019 19:229
  17. Infective endocarditis (IE) is associated with high rates of mortality. Prolonged treatments with high-dose intravenous antibiotics often fail to eradicate the infection, frequently leading to high-risk surgic...

    Authors: Enea Gino Di Domenico, Sara Giordana Rimoldi, Ilaria Cavallo, Giovanna D’Agosto, Elisabetta Trento, Giovanni Cagnoni, Alessandro Palazzin, Cristina Pagani, Francesca Romeri, Elena De Vecchi, Monica Schiavini, Daniela Secchi, Carlo Antona, Giuliano Rizzardini, Rita Barbara Dichirico, Luigi Toma…
    Citation: BMC Microbiology 2019 19:228
  18. The Editor has retracted this article [1] following an investigation by the University of South Alabama which found:

    Authors: Sonya Urnowey, Toshihiro Ansai, Vira Bitko, Koji Nakayama, Tadamichi Takehara and Sailen Barik
    Citation: BMC Microbiology 2019 19:227

    The original article was published in BMC Microbiology 2006 6:26

  19. Salmonella enterica subsp. enterica serovar Dublin (S. Dublin), a cattle adapted serovar causes enteritis, and systemic disease in bovines. The invasive index of this serovar far exceeds that of the other serovar...

    Authors: Narayan Paudyal, Hang Pan, Mohammed Elbediwi, Xiao Zhou, Xianqi Peng, Xiaoliang Li, Weihuan Fang and Min Yue
    Citation: BMC Microbiology 2019 19:226
  20. Caulerpa lentillifera is one of the most important economic green macroalgae in the world. Increasing demand for consumption has led to the commercial cultivation of C. lentillifera in Japan and Vietnam in recent...

    Authors: Zhourui Liang, Fuli Liu, Wenjun Wang, Pengyan Zhang, Xiutao Sun, Feijiu Wang and Heather Kell
    Citation: BMC Microbiology 2019 19:225
  21. Recent studies demonstrated that warming and elevated carbon dioxide (CO2) indirectly affect the soil microbial community structure via plant root exudates. However, there is no direct evidence for how the root e...

    Authors: Jiahui Wu and Shixiao Yu
    Citation: BMC Microbiology 2019 19:224
  22. Our recent ‘-omics’ comparisons of Streptococcus mutans wild-type and lrgAB-mutant revealed that this organism undergoes dynamic cellular changes in the face of multiple exogenous stresses, consequently affecting...

    Authors: Sang-Joon Ahn, Kamal Deep, Matthew E. Turner, Ivan Ishkov, Anthony Waters, Stephen J. Hagen and Kelly C. Rice
    Citation: BMC Microbiology 2019 19:223
  23. Liberibacter crescens is the closest cultured relative of four important uncultured crop pathogens. Candidatus. L. asiaticus, L. americanus, L. africanus cause citrus greening disease, while Ca. L. solanacearum c...

    Authors: Maritsa Cruz-Munoz, Alam Munoz-Beristain, Joseph R. Petrone, Matthew A. Robinson and Eric W. Triplett
    Citation: BMC Microbiology 2019 19:222
  24. TnaphA6-carrying repAci6 plasmids have been detected in Acinetobacter baumannii isolates belonging to global clones, GC1 and GC2, worldwide. Here, we examined whether RepAci6 plasmids family play a role in the di...

    Authors: Parisa Aris, Mohammad Ali Boroumand and Masoumeh Douraghi
    Citation: BMC Microbiology 2019 19:221
  25. We aimed to determine the evolutionary pathways of rifampicin resistance in Staphylococcus aureus, and the impact of resistance mutations in the rpoB gene on fitness.

    Authors: Chong Wang, Renchi Fang, Beibei Zhou, Xuebin Tian, Xiucai Zhang, Xiangkuo Zheng, Siqin Zhang, Guofeng Dong, Jianming Cao and Tieli Zhou
    Citation: BMC Microbiology 2019 19:220
  26. The molecular characterization of carbapenem-resistant hypervirulent Klebsiella pneumoniae (CR-hvKP) isolates is not well studied. Our goal was to investigate the molecular epidemiology of CR-hvKP strains that we...

    Authors: Jun Li, Zi-Yan Huang, Ting Yu, Xiao-Yan Tao, Yong-Mei Hu, Hai-Chen Wang and Ming-Xiang Zou
    Citation: BMC Microbiology 2019 19:219
  27. The broad-leaved Korean pine mixed forest is an important and typical component of a global temperate forest. Soil microbes are the main driver of biogeochemical cycling in this forest ecosystem and have compl...

    Authors: Minghui Liu, Xin Sui, Yanbo Hu and Fujuan Feng
    Citation: BMC Microbiology 2019 19:218
  28. This study is based on data collected to investigate the relation of peri-parturient events (colostrum quality, passive transfer of immunity, calving difficulty) on calf health and antimicrobial use. A compone...

    Authors: Josephine A. Afema, Margaret A. Davis and William M. Sischo
    Citation: BMC Microbiology 2019 19:217
  29. Cellulose is synthesized by an array of bacterial species. Komagataeibacter xylinus is the best characterized as it produces copious amounts of the polymer extracellularly. Despite many advances in the past decad...

    Authors: Luis Salgado, Silvia Blank, Reza Alipour Moghadam Esfahani, Janice L. Strap and Dario Bonetta
    Citation: BMC Microbiology 2019 19:216
  30. Cattle have been identified as a major reservoir of E. coli O157:H7 for human infection; the ecology of the organism in sheep and goats is less understood. This study was carried out to determine prevalence, sour...

    Authors: Solomon Abreham, Akafete Teklu, Eric Cox and Tesfaye Sisay Tessema
    Citation: BMC Microbiology 2019 19:215
  31. Characterization of the skin and wound microbiome is of high biomedical interest, but is hampered by the low biomass of typical samples. While sample preparation from other microbiomes (e.g., gut) has been the...

    Authors: Samuel Verbanic, Colin Y. Kim, John M. Deacon and Irene A. Chen
    Citation: BMC Microbiology 2019 19:214
  32. Shiga toxin-producing Escherichia coli (STEC) are emerging foodborne pathogens that are public health concern. Cattle have been identified as the major STEC reservoir. In the present study, we investigated the pr...

    Authors: Ruyue Fan, Kun Shao, Xi Yang, Xiangning Bai, Shanshan Fu, Hui Sun, Yanmei Xu, Hong Wang, Qun Li, Bin Hu, Ji Zhang and Yanwen Xiong
    Citation: BMC Microbiology 2019 19:213
  33. Several serious vegetable-associated outbreaks of enterohemorrhagic Escherichia coli (EHEC) infections have occurred during the last decades. In this context, vegetables have been suggested to function as seconda...

    Authors: Thorsten Bufe, André Hennig, Jochen Klumpp, Agnes Weiss, Kay Nieselt and Herbert Schmidt
    Citation: BMC Microbiology 2019 19:212
  34. Salmonella enterica serovar Typhimurium is a common food-borne pathogen. S. enterica uses a type III secretion system encoded within Salmonella pathogenicity island 1 (SPI-1) to invade intestinal epithelial cells...

    Authors: Selwan Hamed, Xiaoyi Wang, Riham M. Shawky, Mohamed Emara, Philip D. Aldridge and Christopher V. Rao
    Citation: BMC Microbiology 2019 19:211
  35. Efflux pump mediated antibiotic resistance is an unnoticed and undetected mechanism in clinical microbiology laboratory. RND efflux systems are known for aminoglycoside and tetracycline resistance whereas thei...

    Authors: Shiela Chetri, Deepshikha Bhowmik, Deepjyoti Paul, Piyush Pandey, Debadatta Dhar Chanda, Atanu Chakravarty, Debajyoti Bora and Amitabha Bhattacharjee
    Citation: BMC Microbiology 2019 19:210
  36. The primary and secondary metabolites of fungi are critical for adaptation to environmental stresses, host pathogenicity, competition with other microbes, and reproductive fitness. Drought-derived reactive oxy...

    Authors: Jake C. Fountain, Liming Yang, Manish K. Pandey, Prasad Bajaj, Danny Alexander, Sixue Chen, Robert C. Kemerait, Rajeev K. Varshney and Baozhu Guo
    Citation: BMC Microbiology 2019 19:209
  37. Ustilago esculenta, a typical dimorphic fungus could infect Zizania latifolia and induce host stem swollen to form an edible vegetable called Jiaobai in China. The strains differentiation especially in the mating...

    Authors: Yafen Zhang, Min Wu, Qianwen Ge, Mengfei Yang, Wenqiang Xia, Haifeng Cui, Xiaoping Yu, Shangfa Zhang and Zihong Ye
    Citation: BMC Microbiology 2019 19:208
  38. The decomposition of Microcystis can dramatically change the physicochemical properties of freshwater ecosystems. Bacteria play an important role in decomposing organic matters and accelerating the cycling of mat...

    Authors: Shuren Wang, Dayong Zhao, Jin Zeng, Huimin Xu, Rui Huang, Congcong Jiao and Lin Guo
    Citation: BMC Microbiology 2019 19:207
  39. Little is known about how bacterial endosymbionts colonize host tissues. Because many insect endosymbionts are maternally transmitted, egg colonization is critical for endosymbiont success. Wolbachia bacteria, ca...

    Authors: Steen Christensen, Moises Camacho, Zinat Sharmin, A. J. M. Zehadee Momtaz, Laura Perez, Giselle Navarro, Jairo Triana, Hani Samarah, Michael Turelli and Laura R. Serbus
    Citation: BMC Microbiology 2019 19:206
  40. Cross-resistance, a phenomenon that a pathogen resists to one antimicrobial compound also resists to one or several other compounds, is one of major threats to human health and sustainable food production. It ...

    Authors: Li-Na Yang, Meng-Han He, Hai-Bing Ouyang, Wen Zhu, Zhe-Chao Pan, Qi-Jun Sui, Li-Ping Shang and Jiasui Zhan
    Citation: BMC Microbiology 2019 19:205
  41. Escherichia coli has found to be the predominant uropathogen (50–90%) in uncomplicated, community acquired urinary tract infection (UTI). Uropathogenic Escherichia coli (UPEC) express a multitude of virulence fac...

    Authors: Chhaya Shah, Ratna Baral, Bijay Bartaula and Lok Bahadur Shrestha
    Citation: BMC Microbiology 2019 19:204
  42. Tree shrew is a novel laboratory animal with specific characters for human disease researches in recent years. However, little is known about its characteristics of gut microbial community and intestinal comme...

    Authors: Wenpeng Gu, Pinfen Tong, Chenxiu Liu, Wenguang Wang, Caixia Lu, Yuanyuan Han, Xiaomei Sun, De Xuan Kuang, Na Li and Jiejie Dai
    Citation: BMC Microbiology 2019 19:203
  43. Salmonella has been considered as one of the most important foodborne pathogens that threatened breeding industry and public health. To investigate the prevalence and characterization of Salmonella isolated from ...

    Authors: Jie Yang, Zijing Ju, Yi Yang, Xiaonan Zhao, Zhiyu Jiang and Shuhong Sun
    Citation: BMC Microbiology 2019 19:202
  44. Plants have evolved intimate interactions with soil microbes for a range of beneficial functions including nutrient acquisition, pathogen resistance and stress tolerance. Further understanding of this system i...

    Authors: Fang Liu, Tarek Hewezi, Sarah L. Lebeis, Vince Pantalone, Parwinder S. Grewal and Margaret E. Staton
    Citation: BMC Microbiology 2019 19:201
  45. Tannerella forsythia is a Gram-negative oral pathogen. Together with Porphyromonas gingivalis and Treponema denticola it constitutes the “red complex” of bacteria, which is crucially associated with periodontitis...

    Authors: Valentina M. T. Mayer, Isabel Hottmann, Rudolf Figl, Friedrich Altmann, Christoph Mayer and Christina Schäffer
    Citation: BMC Microbiology 2019 19:200
  46. Candidatus Neoehrlichia mikurensis is an emerging tick-borne pathogen. It is widely distributed in Ixodes ricinus ticks in Europe, but knowledge of its distribution in Norway, where I. ricinus reaches its norther...

    Authors: Andrew Jenkins, Cecilie Raasok, Benedikte N. Pedersen, Kristine Jensen, Åshild Andreassen, Arnulf Soleng, Kristin Skarsfjord Edgar, Heidi Heggen Lindstedt, Vivian Kjelland, Snorre Stuen, Dag Hvidsten and Bjørn-Erik Kristiansen
    Citation: BMC Microbiology 2019 19:199

    The Correction to this article has been published in BMC Microbiology 2020 20:9

  47. Lactobacilli are gatekeepers of vaginal ecosystem impeding growth of pathogenic microbes and their diversity varies across populations worldwide. The present study investigated diversity of human vaginal micro...

    Authors: Sumi Das Purkayastha, Mrinal Kanti Bhattacharya, Himanshu Kishore Prasad, Hrishikesh Upadhyaya, Suparna Das Lala, Kunal Pal, Meenakshi Das, Gauri Dutt Sharma and Maloyjo Joyraj Bhattacharjee
    Citation: BMC Microbiology 2019 19:198
  48. Comparative knowledge of microbiomes and resistomes across environmental interfaces between animal production systems and urban settings is lacking. In this study, we executed a comparative analysis of the mic...

    Authors: Rahat Zaheer, Steven M. Lakin, Rodrigo Ortega Polo, Shaun R. Cook, Francis J. Larney, Paul S. Morley, Calvin W. Booker, Sherry J. Hannon, Gary Van Domselaar, Ron R. Read and Tim A. McAllister
    Citation: BMC Microbiology 2019 19:197
  49. Despite the importance of the B. cereus group as major foodborne pathogens that may cause diarrheal and/or emetic syndrome(s), no study in Tunisia has been conducted in order to characterize the pathogenic potent...

    Authors: Maroua Gdoura-Ben Amor, Sophie Jan, Florence Baron, Noël Grosset, Antoine Culot, Radhouane Gdoura, Michel Gautier and Clarisse Techer
    Citation: BMC Microbiology 2019 19:196

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