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  1. Since bacteria embedded in biofilms are far more difficult to eradicate than planktonic infections, it would be useful to know whether certain Staphylococcus aureus lineages are especially involved in strong biof...

    Authors: Sander Croes, Ruud H Deurenberg, Marie-Louise L Boumans, Patrick S Beisser, Cees Neef and Ellen E Stobberingh
    Citation: BMC Microbiology 2009 9:229
  2. Enterocin AS-48 is produced by Enterococcus faecalis S48 to compete with other bacteria in their environment. Due to its activity against various Gram positive and some Gram negative bacteria it has clear potenti...

    Authors: María J Grande Burgos, Ákos T Kovács, Aleksandra M Mirończuk, Hikmate Abriouel, Antonio Gálvez and Oscar P Kuipers
    Citation: BMC Microbiology 2009 9:227
  3. Approximately 1 out of every 100 individuals has some form of venous insufficiency, which can lead to chronic venous disease and Venous Leg Ulcer (VLU). There are known underlying pathologies which contribute ...

    Authors: Randall D Wolcott, Viktoria Gontcharova, Yan Sun and Scot E Dowd
    Citation: BMC Microbiology 2009 9:226
  4. Cronobacter spp. (formerly Enterobacter sakazakii), are a group of Gram-negative pathogens that have been implicated as causative agents of meningitis and necrotizing enterocolitis in infants. The pathogens are l...

    Authors: Ziad W Jaradat, Qotaiba O Ababneh, Ismail M Saadoun, Nawal A Samara and Abrar M Rashdan
    Citation: BMC Microbiology 2009 9:225
  5. We advocate unifying classical and genomic classification of bacteriophages by integration of proteomic data and physicochemical parameters. Our previous application of this approach to the entirely sequenced ...

    Authors: Rob Lavigne, Paul Darius, Elizabeth J Summer, Donald Seto, Padmanabhan Mahadevan, Anders S Nilsson, Hans W Ackermann and Andrew M Kropinski
    Citation: BMC Microbiology 2009 9:224
  6. The Cronobacter genus (Enterobacter sakazakii) has come to prominence due to its association with infant infections, and the ingestion of contaminated reconstituted infant formula. C. sakazakii and C. malonaticus

    Authors: Adam Baldwin, Michael Loughlin, Juncal Caubilla-Barron, Eva Kucerova, Georgina Manning, Christopher Dowson and Stephen Forsythe
    Citation: BMC Microbiology 2009 9:223
  7. Periodontitis is a chronic inflammatory disease caused by the microbiota of the periodontal pocket. We investigated the association between subgingival bacterial profiles and gene expression patterns in gingiv...

    Authors: Panos N Papapanou, Jan H Behle, Moritz Kebschull, Romanita Celenti, Dana L Wolf, Martin Handfield, Paul Pavlidis and Ryan T Demmer
    Citation: BMC Microbiology 2009 9:221
  8. Background: Cytolethal distending toxin (CDT) is one of the well-characterized virulence factors of Campylobacter jejuni, but it is unknown how CDT becomes surface-exposed or is released from the bacterium to the...

    Authors: Barbro Lindmark, Pramod Kumar Rompikuntal, Karolis Vaitkevicius, Tianyan Song, Yoshimitsu Mizunoe, Bernt Eric Uhlin, Patricia Guerry and Sun Nyunt Wai
    Citation: BMC Microbiology 2009 9:220
  9. Genetic evidence for diversifying selection identified the Merozoite Surface Protein1 block2 (PfMSP1 block2) as a putative target of protective immunity against Plasmodium falciparum. The locus displays three fam...

    Authors: Nitchakarn Noranate, Franck Prugnolle, Hélène Jouin, Adama Tall, Laurence Marrama, Cheikh Sokhna, Marie-Thérèse Ekala, Micheline Guillotte, Emmanuel Bischoff, Christiane Bouchier, Jintana Patarapotikul, Jun Ohashi, Jean-François Trape, Christophe Rogier and Odile Mercereau-Puijalon
    Citation: BMC Microbiology 2009 9:219
  10. We have shown previously that Chlamydophila pneumoniae contains a dual-specific Ser/Thr protein kinase that phosphorylates CdsD, a structural component of the type III secretion apparatus. To further study the ro...

    Authors: Dustin L Johnson, Chris B Stone, David C Bulir, Brian K Coombes and James B Mahony
    Citation: BMC Microbiology 2009 9:218
  11. It has recently been shown that the Trichoderma fungal species used for biocontrol of plant diseases are capable of interacting with plant roots directly, behaving as symbiotic microorganisms. With a view to prov...

    Authors: Ilanit Samolski, Alberto de Luis, Juan Antonio Vizcaíno, Enrique Monte and M Belén Suárez
    Citation: BMC Microbiology 2009 9:217
  12. Contagious bovine pleuropneumonia (CBPP) is a mycoplasmal disease caused by Mycoplasma mycoides subsp. mycoides SC (Mmm SC). Since the disease is a serious problem that can affect cattle production in parts of Af...

    Authors: Dubravka R Miltiadou, Arshad Mather, Edy M Vilei and Dion H Du Plessis
    Citation: BMC Microbiology 2009 9:215
  13. Campylobacter jejuni contains a homologue of the luxS gene shown to be responsible for the production of the signalling molecule autoinducer-2 (AI-2) in Vibrio harveyi and Vibrio cholerae. The aim of this study w...

    Authors: Kathryn Holmes, Tim J Tavender, Klaus Winzer, Jerry M Wells and Kim R Hardie
    Citation: BMC Microbiology 2009 9:214
  14. A low genetic diversity in Francisella tularensis has been documented. Current DNA based genotyping methods for typing F. tularensis offer a limited and varying degree of subspecies, clade and strain level discri...

    Authors: Gagan A Pandya, Michael H Holmes, Jeannine M Petersen, Sonal Pradhan, Svetlana A Karamycheva, Mark J Wolcott, Claudia Molins, Marcus Jones, Martin E Schriefer, Robert D Fleischmann and Scott N Peterson
    Citation: BMC Microbiology 2009 9:213
  15. Mycobacterium avium subspecies paratuberculosis (Map) causes an infectious chronic enteritis (paratuberculosis or Johne's disease) principally of ruminants. The epidemiology of Map is poorly understood, particula...

    Authors: Karen Stevenson, Julio Alvarez, Douwe Bakker, Franck Biet, Lucia de Juan, Susan Denham, Zoi Dimareli, Karen Dohmann, Gerald F Gerlach, Ian Heron, Marketa Kopecna, Linda May, Ivo Pavlik, J Michael Sharp, Virginie C Thibault, Peter Willemsen…
    Citation: BMC Microbiology 2009 9:212
  16. Recent studies have shown that the fecal microbiota is generally resilient to short-term antibiotic administration, but some bacterial taxa may remain depressed for several months. Limited information is avail...

    Authors: Jan S Suchodolski, Scot E Dowd, Elias Westermarck, Jörg M Steiner, Randy D Wolcott, Thomas Spillmann and Jaana A Harmoinen
    Citation: BMC Microbiology 2009 9:210
  17. In the present work the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis was studied at the level of metabolic fluxes. These two strains belong to the marine Roseobacter clade, a ...

    Authors: Tobias Fürch, Matthias Preusse, Jürgen Tomasch, Hajo Zech, Irene Wagner-Döbler, Ralf Rabus and Christoph Wittmann
    Citation: BMC Microbiology 2009 9:209
  18. Results of microbial ecology studies using 16S rRNA sequence information can be deceiving due to differences in rRNA operon copy number and genome size of the detected organisms. It therefore will be useful fo...

    Authors: Rajat Rastogi, Martin Wu, Indrani DasGupta and George E Fox
    Citation: BMC Microbiology 2009 9:208
  19. During the interaction between rhizobia and leguminous plants the two partners engage in a molecular conversation that leads to reciprocal recognition and ensures the beginning of a successful symbiotic integr...

    Authors: Roberto Moscatiello, Sara Alberghini, Andrea Squartini, Paola Mariani and Lorella Navazio
    Citation: BMC Microbiology 2009 9:206
  20. Yersinia pestis, the aetiological agent of plague, has been well defined genotypically on local and worldwide scales. In November 2005, five cases of severe pneumonia of unknown causes, resulting in two deaths, w...

    Authors: Xiaoai Zhang, Rong Hai, Jianchun Wei, Zhigang Cui, Enmin Zhang, Zhizhong Song and Dongzheng Yu
    Citation: BMC Microbiology 2009 9:205
  21. Pantoea agglomerans strains are among the most promising biocontrol agents for a variety of bacterial and fungal plant diseases, particularly fire blight of apple and pear. However, commercial registration of P. ...

    Authors: Fabio Rezzonico, Theo HM Smits, Emilio Montesinos, Jürg E Frey and Brion Duffy
    Citation: BMC Microbiology 2009 9:204
  22. Campylobacter is a major cause of human disease worldwide and poultry are identified as a significant source of this pathogen. Most disease in humans is associated with the consumption of contaminated poultry or ...

    Authors: Ellen M Lutgen, John M McEvoy, Julie S Sherwood and Catherine M Logue
    Citation: BMC Microbiology 2009 9:203
  23. Crohn's disease (CD) is a high morbidity chronic inflammatory disorder of unknown aetiology. Adherent-invasive Escherichia coli (AIEC) has been recently implicated in the origin and perpetuation of CD. Because ba...

    Authors: Margarita Martinez-Medina, Plínio Naves, Jorge Blanco, Xavier Aldeguer, Jesus E Blanco, Miguel Blanco, Carmen Ponte, Francisco Soriano, Arlette Darfeuille-Michaud and L Jesus Garcia-Gil
    Citation: BMC Microbiology 2009 9:202
  24. Streptococcus suis serotype 2 (SS2) is a zoonotic agent that causes death and disease in both humans and swine. A better understanding of SS2-host molecular interactions is crucial for understanding SS2 pathogene...

    Authors: Hongwei Gu, Haodan Zhu and Chengping Lu
    Citation: BMC Microbiology 2009 9:201
  25. Burkholderia cenocepacia are opportunistic Gram-negative bacteria that can cause chronic pulmonary infections in patients with cystic fibrosis. These bacteria demonstrate a high-level of intrinsic antibiotic resi...

    Authors: Silvia Buroni, Maria R Pasca, Ronald S Flannagan, Silvia Bazzini, Anna Milano, Iris Bertani, Vittorio Venturi, Miguel A Valvano and Giovanna Riccardi
    Citation: BMC Microbiology 2009 9:200
  26. The genome of Arthrobacter sp. strain FB24 contains a chromate resistance determinant (CRD), consisting of a cluster of 8 genes located on a 10.6 kb fragment of a 96 kb plasmid. The CRD includes chrA, which encod...

    Authors: Kristene L Henne, Cindy H Nakatsu, Dorothea K Thompson and Allan E Konopka
    Citation: BMC Microbiology 2009 9:199
  27. Quorum sensing is a term describing a bacterial communication system mediated by the production and recognition of small signaling molecules. The LuxS enzyme, catalyzing the synthesis of AI-2, is conserved in ...

    Authors: Gwendoline Kint, Kathleen AJ Sonck, Geert Schoofs, David De Coster, Jos Vanderleyden and Sigrid CJ De Keersmaecker
    Citation: BMC Microbiology 2009 9:198
  28. Helicobacter pylori forms biofilms on glass surfaces at the air-liquid interface in in vitro batch cultures; however, biofilms of H. pylori have not been well characterized. In the present study, we analyzed the ...

    Authors: Hideo Yonezawa, Takako Osaki, Satoshi Kurata, Minoru Fukuda, Hayato Kawakami, Kuniyasu Ochiai, Tomoko Hanawa and Shigeru Kamiya
    Citation: BMC Microbiology 2009 9:197
  29. Arcobacter spp. are a common contaminant of food and water, and some species, primarily A. butzleri and A. cryaerophilus, have been isolated increasingly from human diarrheal stool samples. Here, we describe the ...

    Authors: William G Miller, Irene V Wesley, Stephen LW On, Kurt Houf, Francis Mégraud, Guilin Wang, Emma Yee, Apichai Srijan and Carl J Mason
    Citation: BMC Microbiology 2009 9:196
  30. Actinobacillus pleuropneumoniae causes contagious pleuropneumonia, an economically important disease of commercially reared pigs throughout the world. To cause this disease, A. pleuropneumoniae must rapidly overc...

    Authors: Abdul G Lone, Vincent Deslandes, John HE Nash, Mario Jacques and Janet I MacInnes
    Citation: BMC Microbiology 2009 9:195
  31. Chamydophila pneumoniae (CP) and/or Mycoplasma pneumoniae (MP) are two bacteria detected in vulnerable atheromas. In this study we aimed to analyze whether CP and/or MP aggravates atherosclerosis induced by chole...

    Authors: Sueli B Damy, Maria L Higuchi, Jorge Timenetsky, Márcia M Reis, Suely P Palomino, Renata N Ikegami, Fabiana P Santos, Junko T Osaka and Luiz P Figueiredo
    Citation: BMC Microbiology 2009 9:194
  32. Helicobacter pylori colonizes the human stomach and is associated with gastritis, peptic ulcer, and gastric cancer. This ubiquitous association between H. pylori and humans is thought to be present since the orig...

    Authors: Filipa F Vale, Francis Mégraud and Jorge MB Vítor
    Citation: BMC Microbiology 2009 9:193
  33. The combined sequences encoding a partial and putative rpsI open reading frame (ORF), non-coding (NC) region, a putative ORF for the Campylobacter adhesin to fibronectin-like protein (cadF), a putative Cla_0387 O...

    Authors: Junichi Hirayama, Tsuyoshi Sekizuka, Akihiro Tazumi, Ikue Taneike, John E Moore, B Cherie Millar and Motoo Matsuda
    Citation: BMC Microbiology 2009 9:192
  34. The boundaries of bacterial species and the mechanisms underlying bacterial speciation are matters of intense debate. Theoretical studies have shown that recombination acts as a strong cohesive force preventin...

    Authors: Margarida Carrolo, Francisco R Pinto, Jose Melo-Cristino and Mario Ramirez
    Citation: BMC Microbiology 2009 9:191
  35. Though important in the context of food microbiology and as potential pathogens in immuno-compromised humans, bacterial isolates belonging to the genus Pediococcus are best known for their association with contam...

    Authors: Monique Haakensen, David M Vickers and Barry Ziola
    Citation: BMC Microbiology 2009 9:190
  36. Heterogeneous vancomycin-intermediate Staphylococcus aureus (hVISA) bacteremia is an emerging infection. Our objective was to determine the molecular features of hVISA strains isolated from bacteremic patients an...

    Authors: Yasmin Maor, Levona Lago, Amir Zlotkin, Yeshayahu Nitzan, Natasha Belausov, Debby Ben-David, Nathan Keller and Galia Rahav
    Citation: BMC Microbiology 2009 9:189
  37. The outer membrane protein M35 is a conserved porin of type 1 strains of the respiratory pathogen Moraxella catarrhalis. It was previously shown that M35 is involved in the uptake of essential nutrients required ...

    Authors: Marion Jetter, Nadja Heiniger, Violeta Spaniol, Rolf Troller, André Schaller and Christoph Aebi
    Citation: BMC Microbiology 2009 9:188
  38. The worldwide appearance of drug-resistant strains of H. pylori motivates a search for new agents with therapeutic potential against this family of bacteria that colonizes the stomach, and is associated with aden...

    Authors: Katarzyna Leszczyńska, Andrzej Namiot, David E Fein, Qi Wen, Zbigniew Namiot, Paul B Savage, Scott Diamond, Paul A Janmey and Robert Bucki
    Citation: BMC Microbiology 2009 9:187
  39. The Ada-dependent adaptive response system in Escherichia coli is important for increasing resistance to alkylation damage. However, the global transcriptional and translational changes during this response have ...

    Authors: Jong Hwan Baek, Mee-Jung Han, Sang Yup Lee and Jong-Shin Yoo
    Citation: BMC Microbiology 2009 9:186
  40. Porphyromonas gingivalis is a Gram-negative intracellular pathogen associated with periodontal disease. We have previously reported on whole-cell quantitative proteomic analyses to investigate the differential ex...

    Authors: Erik L Hendrickson, Qiangwei Xia, Tiansong Wang, Richard J Lamont and Murray Hackett
    Citation: BMC Microbiology 2009 9:185
  41. The oomycete Aphanomyces astaci is regarded as the causative agent of crayfish plague and represents an evident hazard for European crayfish species. Native crayfish populations infected with this pathogen suffer...

    Authors: Gerald Hochwimmer, Reinhard Tober, Renè Bibars-Reiter, Elisabeth Licek and Ralf Steinborn
    Citation: BMC Microbiology 2009 9:184
  42. Debaryomyces hansenii is one of the most salt tolerant species of yeast and has become a model organism for the study of tolerance mechanisms against salinity. The goal of this study was to identify key upregulat...

    Authors: Hsiu-fung Chao, Yung-fu Yen and Maurice SB Ku
    Citation: BMC Microbiology 2009 9:182
  43. Pectobacterium carotovorum subsp. carotovorum is a phytopathogenic enterobacterium responsible for soft rot, a disease characterized by extensive maceration of the affected plant tissue. This species also produce...

    Authors: Yung-chieh Chan, Huang-Pin Wu and Duen-yau Chuang
    Citation: BMC Microbiology 2009 9:181
  44. Although bacteria are implicated in the pathogenesis of chronic inflammatory bowel diseases (IBD), mechanisms of intestinal injury and immune activation remain unclear. Identification of adherent-invasive Escheri...

    Authors: Eytan Wine, Juan C Ossa, Scott D Gray-Owen and Philip M Sherman
    Citation: BMC Microbiology 2009 9:180
  45. Pathogenic yersiniae, including Y. pestis, share a type III secretion system (T3SS) that is composed of a secretion machinery, a set of translocation proteins, a control system, and six Yop effector proteins incl...

    Authors: Lingjun Zhan, Lei Yang, Lei Zhou, Yingli Li, He Gao, Zhaobiao Guo, Lianfeng Zhang, Chuan Qin, Dongsheng Zhou and Ruifu Yang
    Citation: BMC Microbiology 2009 9:178

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