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  1. C. albicans is a pathogenic yeast that is the most common cause of fungal infections in humans. Unfortunately, the yeast’s resistance to the antifungal medication fluconazole (FLC) is increasing; furthermore, tes...

    Authors: Chanika Maenchantrarath, Pradchama Khumdee, Seksun Samosornsuk, Narissara Mungkornkaew and Worada Samosornsuk
    Citation: BMC Microbiology 2022 22:153
  2. Leptospirosis is a significant emerging infectious disease worldwide. Rodents are considered to be the most critical hosts of Leptospira spp. Fujian Province is a region highly endemic for leptospirosis in China....

    Authors: Guoying Xu, Haiyan Qiu, Weijun Liu, Xiugao Jiang, Yung-Fu Chang, Jiaxiong Wang, Zhenpeng Li, Yongzhang Zhu, Cuicai Zhang and Fangzhen Xiao
    Citation: BMC Microbiology 2022 22:151
  3. Urinary tract infection (UTI) is one of the most common outpatient bacterial infections. In this study, we isolated and characterized an extensively-drug resistant (XDR) NDM-5-producing Escherichia coli EC1390 fr...

    Authors: Tran Thi Dieu Thuy, Hsu-Feng Lu, Pei-Yun Kuo, Wei-Hung Lin, Tzu-Ping Lin, Yi-Tzu Lee, Tran Thi Thuy Duong, Ming-Cheng Wang, Yi-Hong Lee, Li-Li Wen, Yu-Chen Chen and Cheng-Yen Kao
    Citation: BMC Microbiology 2022 22:150
  4. Probiotic starters can improve the flavor profile, texture, and health-promoting properties of fermented foods. Tetragenococcus halophilus is a halophilic lactic acid bacterium that is a candidate starter for hig...

    Authors: Da Hye Kim, Seul-Ah Kim, Yu Mi Jo, Hee Seo, Ga Yun Kim, Seong Won Cheon, Su Hwi Yang, Che Ok Jeon and Nam Soo Han
    Citation: BMC Microbiology 2022 22:149
  5. The composition and diversity of root microbial community are affected by plant genotypes and soil environment, which in turn affect plant growth and development. Grafting rootstock types of the apple tree can...

    Authors: Jianxun Wang, Ruolin Wang, Feng Kang, Xia Yan, Ling Sun, Nana Wang, Yufeng Gong, Xiaoning Gao and Lili Huang
    Citation: BMC Microbiology 2022 22:148
  6. The microbial population of the intestinal tract and its relationship to specific diseases has been extensively studied during the past decade. However, reports characterizing the bile microbiota are rare. Thi...

    Authors: Mari Kirishima, Seiya Yokoyama, Kei Matsuo, Taiji Hamada, Michiko Shimokawa, Toshiaki Akahane, Tomoyuki Sugimoto, Hirohito Tsurumaru, Matsujiro Ishibashi, Yuko Mataki, Takao Ootsuka, Mitsuharu Nomoto, Chihiro Hayashi, Akihiko Horiguchi, Michiyo Higashi and Akihide Tanimoto
    Citation: BMC Microbiology 2022 22:147
  7. Bioremediation of atrazine-contaminated soil is considered a safe and effective approach in removing contaminates from the soil. However, the effects of adding foreign organisms to assist bioremediation on soi...

    Authors: Zhifei Zhang, Qian Fu, Changyixin Xiao, Mingyue Ding, Dong Liang, Haitao Li and Rongmei Liu
    Citation: BMC Microbiology 2022 22:146
  8. Bacterial pectinase is an enzyme that could be employed in numerous sectors to break down pectin polysaccharide compounds. The goal of this study is to find pectinase-producing bacteria in avocado peel waste a...

    Authors: Setegn Haile, Chandran Masi and Mesfin Tafesse
    Citation: BMC Microbiology 2022 22:145
  9. Although urinary tract infections (UTIs) are extremely common, isolation of causative uropathogens is not always routinely performed, with antibiotics frequently prescribed empirically. This study determined t...

    Authors: Yinka M. Somorin, Nichola-Jane M. Weir, Sally H. Pattison, Martin A. Crockard, Carmel M. Hughes, Michael M. Tunney and Deirdre F. Gilpin
    Citation: BMC Microbiology 2022 22:144
  10. The current diagnostic gold standard for Pneumocystis jirovecii is represented by microscopic visualization of the fungus from clinical respiratory samples, as bronchoalveolar-lavage fluid, defining “proven” P. j...

    Authors: Iacopo Franconi, Alessandro Leonildi, Gianluca Erra, Roberta Fais, Marco Falcone, Emilia Ghelardi and Antonella Lupetti
    Citation: BMC Microbiology 2022 22:143
  11. Although soy sauce-like flavor and soybean flavor are two key contributors to the flavor of fermented foods, the key compounds of soy sauce-like flavor and soybean flavor and production mechanisms are still po...

    Authors: Yongjun Wu, Yi Tao, Jing Jin, Shuoqiu Tong, Sheng Li and Lincheng Zhang
    Citation: BMC Microbiology 2022 22:142
  12. The study describes the application of the multiplex high-resolution melting curve (MHRM) assay for the simultaneous detection of five common bacterial pathogens (Pseudomonas aeruginosa, Staphylococcus aureus, Kl...

    Authors: Jaber Ghorbani, Farhad Bonakdar Hashemi, Fereshteh Jabalameli, Mohammad Emaneini and Reza Beigverdi
    Citation: BMC Microbiology 2022 22:141
  13. Bacteria require specialized secretion systems for the export of molecules into the extracellular space to modify their environment and scavenge for nutrients. The ESX-3 secretion system is required by mycobac...

    Authors: Nastassja L. Kriel, Mae Newton-Foot, Owen T. Bennion, Bree B. Aldridge, Carolina Mehaffy, John T. Belisle, Gerhard Walzl, Robin M. Warren, Samantha L. Sampson and Nico C. Gey van Pittius
    Citation: BMC Microbiology 2022 22:140
  14. Colorectal cancer ranks third globally among all types of cancers. Dysbiosis of the gut microbiota of people with CRC is one of the effective agents in the tumorigenesis and metastasis in this type of cancer. ...

    Authors: Mahsa Mirzarazi, Soroor Bashiri, Ali Hashemi, Mahmoud Vahidi, Bahram Kazemi and Mojgan Bandehpour
    Citation: BMC Microbiology 2022 22:139
  15. High burden of drug-resistant (DR) tuberculosis (TB) is a significant threat to national TB control programs all over the world and in the Russian Federation. Different Mycobacterium tuberculosis (MTB) genotypes ...

    Authors: Anna E. Panova, Anatoliy S. Vinokurov, Anastasiya A. Shemetova, Irina A. Burmistrova, Marina V. Shulgina, Anastasiya G. Samoilova, Irina A. Vasilyeva, Diana V. Vakhrusheva, Tatiana V. Umpeleva, Nataliya I. Eremeeva, Leonid S. Lavrenchuk, Lyudmila A. Golubeva, Tatiana I. Danilova, Tatiana B. Vasilyeva, Vera A. Ugol’kova, Nataliya V. Sosova…
    Citation: BMC Microbiology 2022 22:138
  16. Pseudomonas stutzeri S116 is a sulfur-oxidizing bacteria isolated from marine sludge. It exhibited excellent electricity generation as bioanode and biocathode applied in microbial fuel cells (MFCs). Complete geno...

    Authors: Peng Li, Wenfeng Yuan, Yitie Huang, Caiyu Zhang, Chide Ni, Qi Lin, Zhihuang Zhu and Jianxin Wang
    Citation: BMC Microbiology 2022 22:137
  17. Conjugative plasmids play a major role in the dissemination of antibiotic resistance genes. Knowledge of the plasmid characteristics and behaviour can allow development of control strategies. Here we focus on ...

    Authors: Tomas Nohejl, Adam Valcek, Ivo Papousek, Jana Palkovicova, Alexander M. Wailan, Hana Pratova, Marco Minoia and Monika Dolejska
    Citation: BMC Microbiology 2022 22:136
  18. Bacterial identification at the strain level is a much-needed, but arduous and challenging task. This study aimed to develop a method for identifying and differentiating individual strains among multiple strai...

    Authors: Marta Ferrandis-Vila, Sumeet K. Tiwari, Svenja Mamerow, Torsten Semmler, Christian Menge and Christian Berens
    Citation: BMC Microbiology 2022 22:135
  19. The genus Euplotes Ehrenberg, 1830, one of the most complicated and confused taxa, contains about 160 nominal species. It was once proposed to be divided into four genera, two of which were proved to be non-monop...

    Authors: Kun Han, Hongbo Pan and Jiamei Jiang
    Citation: BMC Microbiology 2022 22:133
  20. Microbiota play important roles in the gastrointestinal tract (GIT) of dairy cattle as the communities are responsible for host health, growth, and production performance. However, a systematic characterizatio...

    Authors: Lei Zhao, Xunde Li, Edward R. Atwill, Sharif S. Aly, Deniece R. Williams and Zhengchang Su
    Citation: BMC Microbiology 2022 22:132
  21. During the last decades, outbreaks of foodborne illnesses have increasingly been linked to fresh and/or minimally processed fruit and vegetables. Enterohemorrhagic Escherichia coli was the causal agent for major ...

    Authors: Maria E. Karlsson, Elisabeth Uhlig, Åsa Håkansson and Beatrix W. Alsanius
    Citation: BMC Microbiology 2022 22:131
  22. The potential pathogenic role of Stenotrophomonas maltophilia in lung disease and in particular in cystic fibrosis is unclear. To develop further understanding of the biology of this taxa, the taxonomic position,...

    Authors: Ad C. Fluit, Jumamurat R. Bayjanov, María Díez Aguilar, Rafael Cantón, Stuart Elborn, Michael M. Tunney, Jelle Scharringa, Barry J. Benaissa-Trouw and Miquel B. Ekkelenkamp
    Citation: BMC Microbiology 2022 22:129
  23. Enteropathogenic Escherichia coli and Salmonella pullorum are two important groups of zoonotic pathogens. At present, the treatment of intestinal pathogenic bacteria infection mainly relies on antibiotics, which ...

    Authors: Ting Li, Na Yang, Da Teng, Ruoyu Mao, Ya Hao, Xiumin Wang and Jianhua Wang
    Citation: BMC Microbiology 2022 22:128
  24. The discovery of new molecules with antimicrobial properties has been a promising approach, mainly when related to substances produced by bacteria. The use of substances produced by bees has evidenced the anti...

    Authors: Ana Carolina Costa Santos, Serena Mares Malta, Raquel Cristina Cavalcanti Dantas, Nina Dias Coelho Rocha, Vasco Ariston de Carvalho Azevedo and Carlos Ueira-Vieira
    Citation: BMC Microbiology 2022 22:127
  25. Grapevine trunk diseases (GTDs) are a threat to grape production worldwide, with a diverse collection of fungal species implicated in disease onset. Due to the long-term and complex nature of GTDs, simultaneou...

    Authors: Bhanupratap R. Vanga, Preeti Panda, Anish S. Shah, Sarah Thompson, Rebecca H. Woolley, Hayley J. Ridgway, Dion C. Mundy and Simon Bulman
    Citation: BMC Microbiology 2022 22:126
  26. Quorum sensing (QS) system can regulate the expression of virulence factors and biofilm formation in Streptococcus mutans. Antimicrobial photodynamic therapy (aPDT) inhibits quorum quenching (QQ), and can be used...

    Authors: Maryam Pourhajibagher, Mojgan Alaeddini, Shahroo Etemad-Moghadam, Bahman Rahimi Esboei, Rashin Bahrami, Rezvaneh sadat Miri Mousavi and Abbas Bahador
    Citation: BMC Microbiology 2022 22:125
  27. Pseudomonas aeruginosa is a common pathogen in Hospitalized patients, and its various resistance mechanisms contribute to patient morbidity and mortality. The main aims of the present study were to assess the sus...

    Authors: Mehdi Bakht, Safar Ali Alizadeh, Sara Rahimi, Raana Kazemzadeh Anari, Mohammad Rostamani, Amir Javadi, Amir Peymani, Seyed Mahmoud Amin Marashi and Farhad Nikkhahi
    Citation: BMC Microbiology 2022 22:124
  28. Haemophilus influenzae was the most aggressive pathogen and formed a major cause of bacterial meningitis and pneumonia in young children and infants, which need medical emergency requiring immediate diagnosis and...

    Authors: Qilong Cao, Shaoshuai Liang, Feng Lin, Jun Cao, Lin Wang, Hui Li, Mengyang Liu, Yajuan Wang, Lijun Zhao, Xiaolong Cao and Yan Guo
    Citation: BMC Microbiology 2022 22:123
  29. Bradyrhizobium japonicum strain SEMIA 5079 (= CPAC 15) is a nitrogen-fixing symbiont of soybean broadly used in commercial inoculants in Brazil. Its genome has about 50% of hypothetical (HP) protein-coding genes,...

    Authors: Everton Geraldo Capote Ferreira, Douglas Fabiano Gomes, Caroline Vanzzo Delai, Marco Antônio Bacellar Barreiros, Luciana Grange, Elisete Pains Rodrigues, Liliane Marcia Mertz Henning, Fernando Gomes Barcellos and Mariangela Hungria
    Citation: BMC Microbiology 2022 22:122
  30. Oil spills are ranked among the greatest global challenges to humanity. In Uganda, owing to the forthcoming full-scale production of multi-billion barrels of oil, the country’s oil pollution burden is anticipa...

    Authors: Jamilu E. Ssenku, Abdul Walusansa, Hannington Oryem-Origa, Paul Ssemanda, Saidi Ntambi, Francis Omujal and Abubakar Sadik Mustafa
    Citation: BMC Microbiology 2022 22:120
  31. 16S rDNA-PCR for the identification of a bacterial species is an established method. However, the DNA extraction reagents as well as the PCR reagents may contain residual bacterial DNA, which consequently gene...

    Authors: Konrad Egli, Martin Risch, Lorenz Risch and Thomas Bodmer
    Citation: BMC Microbiology 2022 22:119
  32. Escherichia coli (E. coli) is the most common bacterial species implicated in various types of infections including septicemia, gastroenteritis, urinary tract infections, meningitis and others pathologies. These ...

    Authors: Boukaré Kaboré, Ganamé Abasse Ouédraogo, Hama Cissé, Henri S. Ouédraogo, Emmanuel Sampo, Koudbi Jacob Zongo, Boukaré Zeba, Yves Traoré, Olivier Gnankiné, Idrissa Sanou and Aly Savadogo
    Citation: BMC Microbiology 2022 22:118
  33. Currently, few studies focus on the association between gut microbiota and systemic lupus erythematosus (SLE), and much less studies consider the effect of drug usage. Proton pump inhibitors (PPIs) are commonl...

    Authors: Xian-Bao Li, Xiu-Jie Chu, Nv-Wei Cao, Hua Wang, Xin-Yu Fang, Yin-Guang Fan, Bao-Zhu Li and Dong-Qing Ye
    Citation: BMC Microbiology 2022 22:117
  34. Ice nucleation active (INA) bacteria are a group of microorganisms that can act as biological nucleator due to their ice nucleation protein property. Unfortunately, little is known about their prevalence and c...

    Authors: Vivia Khosasih, Niko Prasetyo, Edi Sudianto and Diana Elizabeth Waturangi
    Citation: BMC Microbiology 2022 22:116
  35. Karst tiankengs serve as a reservoir of biodiversity in the degraded karst landscape areas. However, the microbial diversity of karst tiankengs is poorly understood. Here, we investigated the composition and f...

    Authors: Cong Jiang, Xiao-Rui Sun, Jie Feng, Su-Feng Zhu and Wei Shui
    Citation: BMC Microbiology 2022 22:115
  36. The increasing emergence of multidrug-resistant Gram-positive bacterial infections necessitates new antibacterial agents with novel mechanisms of action that can be used to treat these infections. Lomitapide h...

    Authors: Yufang Zhang, Yiying Zhang, Chengchun Chen, Hang Cheng, Xiangbin Deng, Duoyun Li, Bing Bai, Zhijian Yu, Qiwen Deng, Jie Guo and Zewen Wen
    Citation: BMC Microbiology 2022 22:114
  37. Silver ions have potent broad-spectrum antimicrobial activity and are widely incorporated into a variety of products to limit bacterial growth. In Enterobacteriaceae, decreased silver susceptibility has been m...

    Authors: Charlotte A. Woolley, J. Mark Sutton and Matthew E. Wand
    Citation: BMC Microbiology 2022 22:113
  38. Black shank disease caused by Phytophthora nicotianae is a serious threat to flue-cured tobacco production. Whole-plant resistance is characterized by the expression of a number of pathogenesis-related proteins, ...

    Authors: Ruifang Song, Yujiao Tan, Waqar Ahmed, Guisu Zhou and Zhengxiong Zhao
    Citation: BMC Microbiology 2022 22:112
  39. Blastocystis sp., is a eukaryote of the large intestine, which is reported from almost all countries. The pathogenesis of this protist is not clear. The current study aimed to analyze the effects of Blastocystis ...

    Authors: Hanieh Mohammad Rahimi, Abbas Yadegar, Hamid Asadzadeh Aghdaei, Hamed Mirjalali and Mohammad Reza Zali
    Citation: BMC Microbiology 2022 22:111
  40. Several microorganisms inhabit the mammalian gastrointestinal tract and are associated with the pathogenesis of various diseases, including cancer. Recent studies have indicated that several probiotics produce...

    Authors: Shotaro Isozaki, Hiroaki Konishi, Hiroki Tanaka, Chikage Yamamura, Kentaro Moriichi, Naoki Ogawa and Mikihiro Fujiya
    Citation: BMC Microbiology 2022 22:110
  41. Staphylococcus aureus is a notorious human pathogen that causes often lethal systemic conditions that are mostly medical device associated biofilm infections. Similarly, coagulase negative staphylococci are emer...

    Authors: Sarita Manandhar, Anjana Singh, Ajit Varma, Shanti Pandey and Neeraj Shrivastava
    Citation: BMC Microbiology 2022 22:109
  42. Biopriming as a new technique of seed treatment involves the application of beneficial microorganisms on the seed surface to stimulate seed germination, plant growth, and protect the seed from soil and seed-bo...

    Authors: Rabab A. Metwally, Reda E. Abdelhameed, Shereen A. Soliman and Asmaa H. Al-Badwy
    Citation: BMC Microbiology 2022 22:108
  43. In the present research, challenges arose when many reports have been published on the poisoning of humans due to the ingestion of crops of Crataegus plants contaminated with cyanobacterial toxins. The discovery ...

    Authors: Bahareh Nowruzi, Lenka Hutárová, Itzel Becerra Absalón and Liwei Liu
    Citation: BMC Microbiology 2022 22:107
  44. Staphylococcus aureus is a leading cause of human infections. The spread of antibiotic-resistant staphylococci has driven the search for novel strategies to supersede antibiotics use. Thus, targeting bacterial v...

    Authors: Fatma Al-zahraa A. Yehia, Nehal Yousef and Momen Askoura
    Citation: BMC Microbiology 2022 22:106

    The Correction to this article has been published in BMC Microbiology 2022 22:130

  45. State-of-the-art renewal has indicated the improvement of diagnostics of patients with metabolic associated fatty liver disease (MAFLD) and/or type II diabetes mellitus (T2DM) by dissecting the clinical charac...

    Authors: Qiuping Yang, Leisheng Zhang, Qian Li, Man Gu, Qiu Qu, Xinglong Yang, Qinghua Yi, Kunli Gu, Linli Kuang, Mei Hao, Jing Xu and Hongju Yang
    Citation: BMC Microbiology 2022 22:105
  46. Bacterial floc formation plays a central role in the activated sludge (AS) process. The formation of AS flocs has long been known to require exopolysaccharide biosynthesis. We had demonstrated that both expoly...

    Authors: Na Gao, Jingcheng Dai, Yaqi Liu, Shuyang Li, Jing Wang, Wenxuan Lu and Dongru Qiu
    Citation: BMC Microbiology 2022 22:104

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