EFSA (European Food Safety Authority), ECDC (European Centre forDisease Prevention and Control). The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2014. EFSA J. 2015;13(12):4329.
Google Scholar
Alton GG, Forsyth JRL. Brucella. In: Galveston SB, editor. Medical Microbiology. Fourthth ed. Texas: University of Texas Medical Branch; 1996. p. 137–46.
Google Scholar
Bang B. The etiology of epizootic abortion. J Comp Pathol Ther. 1897;10:125IN122–149.
Article
Google Scholar
Meyer KF, Shaw EB. A comparison of the morphologic, cultural and biochemical characteristics of B. abortus and B. melitensis* studies on the genus Brucella nov. gen. I. J Infect Dis. 1920;27(3):173–84.
Article
Google Scholar
Godfroid J, Cloeckaert A, Liautard J-P, Kohler S, Fretin D, Walravens K, Garin-Bastuji B, Letesson J-J. From the discovery of the Malta fever’s agent to the discovery of a marine mammal reservoir, brucellosis has continuously been a re-emerging zoonosis. Vet Res. 2005;36:313–26.
Article
PubMed
Google Scholar
Seleem MN, Boyle SM, Sriranganathan N. Brucellosis: a re-emerging zoonosis. Vet Microbiol. 2010;140(3–4):392–8.
Article
PubMed
Google Scholar
Young EJ, Corbel MJ. Brucellosis: Clinical and Laboratory Aspects. Boca Raton: CRC press; 1989. ISBN 0-8493-6661-5.
Italian Ministry of Health. Decreto n. 651 del 27 agosto 1994. Regolamento concernente il piano nazionale per la eradicazione della brucellosi negli allevamenti bovini. In.: Gazzetta Ufficiale Serie Generale n. 277 del 26 novembre 1994; 1994.
Graziani C, Mancini FR, Adone R, Marianelli C, Pasquali P, Rizzo C, Bella A, De Massis F, Danzetta ML, Calistri P, et al. La brucellosi in Italia dal 1998 al 2011, Roma: Istituto Superiore di Sanità (Rapporti ISTISAN 13/45). 2013. p. 75.
Google Scholar
Calistri P, Iannetti S, Atzeni M, Di Bella C, Schembri P, Giovannini A. Risk factors for the persistence of bovine brucellosis in Sicily from 2008 to 2010. Prev Vet Med. 2012;110(3):329–34.
Foster JT, Beckstrom-Sternberg SM, Pearson T, Beckstrom-Sternberg JS, Chain PS, Roberto FF, Hnath J, Brettin T, Keim P. Whole-genome-based phylogeny and divergence of the genus Brucella. J Bacteriol. 2009;191(8):2864–70.
Article
CAS
PubMed
PubMed Central
Google Scholar
Garin-Bastuji B, Mick V, Le Carrou G, Allix S, Perrett LL, Dawson CE, Groussaud P, Stubberfield EJ, Koylass M, Whatmore AM. Examination of taxonomic uncertainties surrounding Brucella abortus biovar 7 using phenotypic and molecular approaches. Appl Environ Microbiol. 2013;AEM. 03755–03713.
Ferreira AC, Chambel L, Tenreiro T, Cardoso R, Flor L, Dias IT, Pacheco T, Garin-Bastuji B, Le Flèche P, Vergnaud G, et al. MLVA16 typing of Portuguese human and animal Brucella melitensis and Brucella abortus isolates. PLoS One. 2012;7(8):e42514.
Article
CAS
PubMed
PubMed Central
Google Scholar
Garofolo G, Ancora M, Di Giannatale E. MLVA-16 loci panel on Brucella spp. using multiplex PCR and multicolor capillary electrophoresis. J Microbiol Methods. 2013;92(2):103–7.
Article
CAS
PubMed
Google Scholar
Allen A, Breadon E, Byrne A, Mallon T, Skuce R, Groussaud P, Dainty A, Graham J, Jones K, Pollock L. Molecular epidemiology of Brucella abortus in Northern Ireland–1991 to 2012. PLoS One. 2015;10(9):e0136721.
Article
PubMed
PubMed Central
Google Scholar
Her M, Kang SI, Cho DH, Cho YS, Hwang IY, Heo YR, Jung SC, Yoo HS. Application and evaluation of the MLVA typing assay for the Brucella abortus strains isolated in Korea. BMC Microbiol. 2009;9:230.
Article
PubMed
PubMed Central
Google Scholar
Garofolo G, Di Giannatale E, De Massis F, Zilli K, Ancora M, Camma C, Calistri P, Foster JT. Investigating genetic diversity of Brucella abortus and Brucella melitensis in Italy with MLVA-16. Infect Genet Evol. 2013;19:59–70.
Article
PubMed
Google Scholar
Decker JE, McKay SD, Rolf MM, Kim J, Molina Alcalá A, Sonstegard TS, Hanotte O, Götherström A, Seabury CM, Praharani L, et al. Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle. PLoS Genet. 2014;10(3):e1004254.
Article
PubMed
PubMed Central
Google Scholar
Groeneveld LF, Lenstra JA, Eding H, Toro MA, Scherf B, Pilling D, Negrini R, Finlay EK, Jianlin H, Groeneveld E, et al. Genetic diversity in farm animals–a review. Anim Genet. 2010;41(s1):6–31.
Article
PubMed
Google Scholar
Moioli B, Napolitano F, Catillo G. Genetic diversity between Piedmontese, Maremmana, and Podolica cattle breeds. J Hered. 2004;95(3):250–6.
Article
CAS
PubMed
Google Scholar
Le Fleche P, Jacques I, Grayon M, Al Dahouk S, Bouchon P, Denoeud F, Nockler K, Neubauer H, Guilloteau LA, Vergnaud G. Evaluation and selection of tandem repeat loci for a Brucella MLVA typing assay. BMC Microbiol. 2006;6(1):9.
OIE Office International des Epizooties, World Organization for Animal Health: Chapter 2.1.4. Brucellosis (Brucella abortus, B. melitesis, and B. suis) (Infection with B. abortus, B. melitesis and B. suis). Manual of diagnostic tests and vaccines for terrestrial animals 2016 (Available at: http://www.oie.int/fileadmin/Home/eng/Health_standards/tahm/2.01.04_BRUCELLOSIS.pdf). Accesed 4 May 2016.
Pearson T, Okinaka RT, Foster JT, Keim P. Phylogenetic understanding of clonal populations in an era of whole genome sequencing. Infect Genet Evol. 2009;9(5):1010–9.
Article
CAS
PubMed
Google Scholar
Garofolo G, Foster JT, Drees K, Zilli K, Platone I, Ancora M, Cammà C, De Massis F, Calistri P, Di Giannatale E. Genome sequences of 11 Brucella abortus isolates from persistently infected Italian regions. GenomeA. 2015;3(6):e01402–01415.
Article
PubMed
PubMed Central
Google Scholar
Sahl JW, Lemmer D, Travis J, Schupp J, Gillece J, Aziz M, Driebe E, Drees K, Hicks N, Williamson C, et al. The Northern Arizona SNP Pipeline (NASP): accurate, flexible, and rapid identification of SNPs in WGS datasets. bioRxiv. 2016. http://biorxiv.org/content/biorxiv/early/2016/01/25/037267.full.pdf. Accessed 4 May 2016.
Li H, Durbin R. Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinformatics. 2009;25(14):1754–60.
Article
CAS
PubMed
PubMed Central
Google Scholar
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M, et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 2010;20(9):1297–303.
Article
CAS
PubMed
PubMed Central
Google Scholar
Wattam AR, Abraham D, Dalay O, Disz TL, Driscoll T, Gabbard JL, Gillespie JJ, Gough R, Hix D, Kenyon R, et al. PATRIC, the bacterial bioinformatics database and analysis resource. Nucleic Acids Res. 2014;42(Database issue):D581–91.
Swofford DL: PAUP*: phylogenetic analysis using parsimony, version 4.0 b10. 2003.
Keim P, Van Ert MN, Pearson T, Vogler AJ, Huynh LY, Wagner DM. Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales. Infect Genet Evol. 2004;4(3):205–13.
Article
CAS
PubMed
Google Scholar
Birdsell DN, Pearson T, Price EP, Hornstra HM, Nera RD, Stone N, Gruendike J, Kaufman EL, Pettus AH, Hurbon AN. Melt analysis of mismatch amplification mutation assays (Melt-MAMA): a functional study of a cost-effective SNP genotyping assay in bacterial models. PLoS One. 2012;7(3):e32866. 32810.31371/journal.pone.0032866.
Article
CAS
PubMed
PubMed Central
Google Scholar