Pfeiler EA, Klaenhammer T: The genomics of lactic acid bacteria. Trends Microbiol. 2007, 15: 546-
Article
PubMed
CAS
Google Scholar
Makarova K, Koonin E: Evolutionary genomics of lactic acid bacteria. J Bacteriol. 2007, 189: 1199-1208.
Article
PubMed
CAS
PubMed Central
Google Scholar
Stiles M, Holzapfel W: Lactic acid bacteria of foods and their current taxonomy. Int J Food Microbiol. 1997, 36: 1-29.
Article
PubMed
CAS
Google Scholar
Lukjancenko O, Ussery D, Wassenaar TM: Comparitive genomics of Bifidobacterium, Lactobacillus and related probiotic genera. Microb Ecol. 2012, 63: 651-673.
Article
PubMed
CAS
PubMed Central
Google Scholar
De Vuyst L, Vandamme E: Bacteriocins of lactic acid bacteria. 1994, Scotland: Blackie Academic & Professional, 320-539.
Book
Google Scholar
Kleerebezem M, Hols P, Bernard E, Rolain T, Zhou M: The extracellular biology of the lactobacilli. FEMS Microbiol Rev. 2010, 34: 199-230.
Article
PubMed
CAS
Google Scholar
Hammes WP, Hertel C: The genus Lactobacillus and Carnobacterium. Prokaryotes. 2006, 4: 320-403.
Article
Google Scholar
Koonin E: The logic of chance: The nature and origin of biological evolution. 2012, New Jersey, US: First. Pearson Education
Google Scholar
Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V, Polouchine N, Shakhova V, Grigoriev I, Lou Y, Rohksar D, Lucas S, Huang K, Goodstein DM, Hawkins T, Plengvidhya V, Welker D, Hughes J, Goh Y, Benson A, Baldwin K, Lee J-H, Díaz-Muñiz I, Dosti B, Smeianov V, Wechter W, Barabote R, et al: Comparative genomics of the lactic acid bacteria. Proc Natl Acad Sci U S A. 2006, 103: 15611-15616.
Article
PubMed
PubMed Central
Google Scholar
Bottacini F, Milani C, Turroni F, Sanchez B, Foroni E, Duranti S, Serafini F, Viappiani A, Strati F, Ferrarini A, Delledonne M, Henrissat B, Coutinho P, Fitzgerald GF, Margolles A, van Sinderen D, Ventura M: Bifidobacterium asteroides PRL2011 Genome Analysis Reveals Clues for Colonization of the Insect Gut. PLoS One. 2012, 7:
Google Scholar
Reid G, Jass J, Sebulsky MT, McCormick JK: Potential uses of probiotics in clinical practice. Clin Microbiol Rev. 2003, 16: 658-672.
Article
PubMed
PubMed Central
Google Scholar
Van de Guchte M, Penaud S, Grimaldi C, Barbe V, Bryson K, Nicolas P, Robert C, Oztas S, Mangenot S, Couloux A, Loux V, Dervyn R, Bossy R, Bolotin A, Batto J-M, Walunas T, Gibrat J-F, Bessières P, Weissenbach J, Ehrlich SD, Maguin E: The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution. Proc Natl Acad Sci U S A. 2006, 103: 9274-9279.
Article
PubMed
CAS
PubMed Central
Google Scholar
Liu M, Siezen R, Nauta A: In silico prediction of horizontal gene transfer events in Lactobacillus delbrueckii ssp. bulgaricus and Streptococcus thermophilus reveals proto-cooperation in yoghurt manufacturing. Appl Environ Microbiol. 2009, 75: 4120-
Article
PubMed
CAS
PubMed Central
Google Scholar
Olofsson TC, Vásquez A: Detection and identification of a novel lactic acid bacterial flora within the honey stomach of the honey Bee apis mellifera. Curr Micriobiology. 2008, 57: 356-
Article
CAS
Google Scholar
Vásquez A, Forsgren E, Fries I, Paxton RJ, Flaberg E, Olofsson TC: Symbionts as major modulators of insect health: lactic acid bacteria and honey bees. PLoS ONE. 7 (3): e33188-doi:10.1371/journal.pone.0033188
Vásquez A, Olofsson TC: The lactic acid bacteria involved in the production of bee pollen and bee bread. J Apic Res Bee World. 2009, 48 (3): 189-195.
Article
Google Scholar
Vásquez A, Olofsson TC, Sammataro D: A scientific note on the lactic acid bacterial flora discovered in the honey stomach of Swedish honey bees - a continuing study on honey bees in the USA. Apidologie. 2009, 40: 26-28.
Article
Google Scholar
Forsgren E, Olofsson TC, Vásquez A, Fries I: Novel lactic acid bacteria inhibiting Paenibacillus larvae in honey bee larvae. Apidologie. 2010, 42: 99-108.
Article
Google Scholar
van de Guchte M, Pascale S, Chervaux C, Smokvina T,DS, Maguin E: Stress responses in lactic acid bacteria. Antonie Van Leeuwenhock. 2002, 82: 187-216.
Article
CAS
Google Scholar
Desvaux M, Hebraud M, Talon R, Henderson IR: Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue. Trends Microbiol. 2009, 17: 139-145.
Article
PubMed
CAS
Google Scholar
Zhou M, Theunissen D, Wels M, Siezen R: LAB-secretome: a genome scale comparative analysis of the predicted extracellular and surface associated proteins of lactic acid bacteria. BMC Genomics. 2010, 11:
Google Scholar
Patrucia S, Hutu I: Economic benefits of using prebiotic and probiotic products as supplements in stimulation feeds administered to bee colonies. 2013, Anim Sci: Turkish J Vet, 37-
Google Scholar
Deepika G, Charalampopoulus D: Surface and Adhesion properties of Lactobacilli. Advances in Applied Microbiology. 2010, 70: 127-152.
Article
PubMed
CAS
Google Scholar
Cotter PD, Hill C, Ross R: Bacteriocins: developing innate immunity for food. Nat Rev Microbiol. 2005, 3: 777-788.
Article
PubMed
CAS
Google Scholar
Cintas L, Casaus M, Herranz C, Nes I, Hernandez P: Review: bacteriocins of lactic acid bacteria. Food Sci Technol Int. 2001, 7: 281-305.
Article
CAS
Google Scholar
Eijsink VG, Axelsson L, Diep DB, Holo H: Production of class II bacteriocins by lactic acid bacteria, an example of biological warfare and communication. Antonie Van Leeuwenhock. 2002, 81: 639-654.
Article
CAS
Google Scholar
Joerger M, Klaenhammer T: Cloning, expression and nucleotide sequence of the Lactobacillus helveticus 481 gene encoding the bacteriocin helveticin J. J Bacteriol. 1990, 172:
Google Scholar
Lee J, Li X, O’Sullivan D: Transcription analysis of the lantibiotic gene cluster from Bifidobacterium longum DJO10A. Appl Environ Microbiol. 2011, 77: 5879-5887.
Article
PubMed
CAS
PubMed Central
Google Scholar
Pei J, Grishin NV: COG3926 And COG5526: a tale of two new lysozyme-like protein families. Protein Sci. 2005, 14: 2574-2581.
Article
PubMed
CAS
PubMed Central
Google Scholar
Novik G, Astapovich N, Ryabaya N: Production of Hydrolases by Lactic Acid Bacteria and Bifidobacteria and Their Antibiotic Resistance. Appl Biochem Microbiol. 2007, 43: 292-297.
Article
Google Scholar
Pessione E: Lactic acid bacteria contribution to gut microbiota complexity: lights and shadows. Front Cell Infect Microbiol. 2012, 2:
Google Scholar
Jeffery CJ: Moonlighting proteins: old proteins learning new tricks. TRENDS Genet. 2003, 19: 415-
Article
PubMed
CAS
Google Scholar
Kinoshita H, Uchida H, Kawai Y, Kawasaki T, Wakahara N, Matsuo H, Watanabe M, Kitazawa H, Saito T: Cell Surface Lactobacillus plantarum LA318 glyceraldehyde 3-phosphate dehydrogenase (GAPDH) adheres to human colonic mucin. J Appl Microbiol. 2008, 104: 1667-1674.
Article
PubMed
CAS
Google Scholar
Hu S, Kong J, Sun Z, Han L, Kong W, Yang P: Heterologous protein display on the cell surface of Lactic acid bacteria mediated by S-layer protein. Microb Cell Fact. 2011, 10 (86):
Sara M, Sleyter UB: S-layer proteins. J Bacteriol. 2000, 182: 859-
Article
PubMed
CAS
PubMed Central
Google Scholar
Åvall- Jääskeläinen S, Palva A: Lactobacillus surface layers and their applications. FEMS Microbiol Rev. 2005, 29: 511-529.
Article
PubMed
Google Scholar
Poppinga L, Janesch B, Fünfhaus A, Sekot G, Garcia-Gonzalez E, Hertlein G, Hedtke K, Schäffer C, Genersch E: Identification and functional analysis of the S-layer protein SplA of Paenibacillus larvae, the causative agent of american foulbrood of honey bees. PLoS Pathog. 2012, 8: e1002716-
Article
PubMed
CAS
PubMed Central
Google Scholar
LeBeer S, Vanderleyden J, De Keersmaecker SC: Genes and molecules of lactobacilli supporting probiotic action. Microbiol Mol Biol Rev. 2008, 72: 728-764.
Article
PubMed
CAS
PubMed Central
Google Scholar
Johnson-Henry K, Hagen K, Gordonpour M, Tompkins T, Sherman P: Surface-layer protein extracts from Lactobacillus helveticus inhibit enterohaemorrhagic Escherichia coli O157:H7 adhesion to epithelial cells. Cell Microbiol. 2007, 9: 356-367.
Article
PubMed
CAS
Google Scholar
Guglielmetti S, Tamagnini I, Mora D, Minuzzo M, Scarafoni A, Arioli S, Hellman J, Parini C: Implication of an outer surface lipoprotein in adhesion of Bifidobacterium bifidum to caco-2 cells. Appl Environ Microbiol. 2008, 74:
Google Scholar
Sugimoto S, Al-Mahin A, Sonomoto K: Molecular chaperones in Lactic acid bacteria: physiological consequences and biochemical properties. J Biosci Bioeng. 2008, 106: 324-336.
Article
PubMed
CAS
Google Scholar
Flower AM: The secY translocation complex: convergence of genetics and structure. Trends Microbiol. 2007, 15: 203-210.
Article
PubMed
CAS
Google Scholar
Bergonzelli GE, Granato D, Pridmore RD, Marvin-Guy LF, Donnicola D: GroEL of Lactobacillus johnsoni La1 (NCC533) is cell surface associated: potential role in interactions with the host and the gastric pathogen Helicobacter pylori. Infect Immun. 2006, 74: 425-
Article
PubMed
CAS
PubMed Central
Google Scholar
Bukau B, Horwich AL: The Hsp70 and Hsp60 chaperone machines. Cell. 1998, 92: 351-366.
Article
PubMed
CAS
Google Scholar
Hu H-J, Yang C-K, Ewis HE, Zhang X-Z, Lu C-D, Pan Y, Abdelal AT, Tai PC: Nonclassical protein secretion by Bacillus subtilis in the stationary phase is not due to cell lysis. J Bacteriol. 2011, 193:
Google Scholar
Kwakman PH, te Velde A, de Boer L: Two major medicinal honeys have different mechanisms of bactericidal activity. PLoS One. 2011, 6: e17709-
Article
PubMed
CAS
PubMed Central
Google Scholar
Lusby P, Coombes A, Wilkinson J: Bactericidal activity of different honeys against pathogenic bacteria. Elsevier. 2005, 36: 464-467.
CAS
Google Scholar
Lei B, Mackie S, Musser JM: Identification and immunogenicity of group A Streptococcus culture supernatant proteins. Infect Immun. 2000, 68: 6807-6818.
Article
PubMed
CAS
PubMed Central
Google Scholar
Karlsson C, Malmström L, Aebersold R, Malmström J: Proteome-wide selected reaction monitoring assays for the human pathogen Streptococcus pyogenes. Nat Commun. 2012, 3: 2367-
Google Scholar
Schägger H: Tricine-SDS-PAGE. Nat Protoc. 2006, 1: 16-22.
Article
PubMed
Google Scholar
Shevchenko A, Wilm M, Vorm O, Mann M: Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. Anal Chem. 1996, 68: 850-
Article
PubMed
CAS
Google Scholar
Perkins DN, Pappin DJ, Creasy D, Cottrell J: Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis. 1999, 20: 3551-3567.
Article
PubMed
CAS
Google Scholar
Altschul SF, Gish W, Miller W, Myers E, Lipman D: Basic local alignment search tool. J Mol Biol. 1990, 215: 403-410.
Article
PubMed
CAS
Google Scholar
Camacho C, Coulouris G, Avagyan V, Ma N, Papadopolous J, Bealer K, Madden TL: BLAST+: architecture and explanations. BM Bioinforma. 2009, 10: 421-
Article
Google Scholar
Finn RD, Mistry J, Tate J, Coggill P, Heger A, Pollington JE, Gavin OL, Gunasekaran P, Ceric G, Forslund K, Holm L, Sonnhammer ELL, Eddy SR, Bateman A: The pfam protein families database. Nucleic Acids Res. 2010, 38: D211-D222. Database issue
Article
PubMed
CAS
PubMed Central
Google Scholar
Zdobnov EM: Apweiler R: signature-recognition methods in InterPro. 2001, 17: 847-848.
Google Scholar
Goujon M, McWilliam H, Li W, Valentin F, Squizzato S, Paern J, Lopez R: A new bioinformatics analysis tools framework at EMBL-EBI. Nucleic Acids Res. 2010, 38: W695-W699. Web Server issue
Article
PubMed
CAS
PubMed Central
Google Scholar
Ermolaeva MD, Khalak HG, White O, Smith HO, Salzberg SL: Prediction of transcription terminators in bacterial genomes. J Mol Biol. 2000, 301: 27-33.
Article
PubMed
CAS
Google Scholar
Côté RG, Griss J, Dianes JA, Wang R, Wright JC, van den Toorn HWP, van Breukelen B, Heck AJR, Hulstaert N, Martens L, Reisinger F, Csordas A, Ovelleiro D, Perez-Rivevol Y, Barsnes H, Hermjakob H, Vizcaíno JA: The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium. Mol Cell Proteomics. 2012, 11: 1682-1689.
Article
PubMed
PubMed Central
Google Scholar
NCBI BLAST. [http://blast.ncbi.nlm.nih.gov/],