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Fig. 4 | BMC Microbiology

Fig. 4

From: Sediment-associated microbial community profiling: sample pre-processing through sequential membrane filtration for 16S rRNA amplicon sequencing

Fig. 4

Linear Discriminant Analysis (LDA) Effect Size (LEfSe) plot of indicator taxa identified from non-processed (NP), and sequential filtered (10, 5, and 0.22 μm) sediment samples. A Cladogram representing the hierarchical structure of the indicator taxa identified between the non-processed and filtered samples (filter). Each filled circle represents one indicator taxa. Blue, indicator taxa statistically overrepresented in "NP"; red indicator taxa statistically overrepresented in "0.22"; green, indicator taxa statistically overrepresented in "10". B Identified indicator taxa grouped by filter and ranked by effect size. The threshold for LDA score was > 2.0. The letter before the taxa indicates taxonomic level: “p_” for phylum; “c_” for class; “o_” for order; “f_” for family; and “g_” for genus

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