Table 3 Group specificity of the mce genes in terms of the detection of the exclusively absent clusters of genes by pan-genomic analysis
Absent from TMI group | Â | Â |
|---|---|---|
Derived strain (strain group) of hit cluster | Possible function | Homologous genes in ATCC13950 |
MOTT64(MP-MIP) | virulence factor Mce | OCU_RS29085 |
MOTT64(MP-MIP) | mammalian cell entry protein | OCU_RS29065 |
KCTC29084(MP-MIP) | mammalian cell entry protein | OCU_RS29070 |
JCM30622(MP-MIP) | mammalian cell entry protein | OCU_RS29075 |
JCM30622(MP-MIP) | virulence factor Mce family protein | OCU_RS29060 |
1099801.4(M. yongonense) | virulence factor Mce | OCU_RS29080 |
Absent from MP-MIP group | Â | Â |
Derived strain (strain group) of hit cluster | Possible function | Homologous genes in ATCC13950 |
M023(TMI) | mammalian cell entry protein | OCU_RS48855 |
FLAC0162(TMI) | Mce family protein Mce1B | OCU_RS48875 |
1099801.4(M. yonogonense) | Mce family protein Mce1C | OCU_RS48870 |
05–1390(M. yonogonense) | Mce family protein Mce2A | OCU_RS28225 |
05–1390(M. yonogonense) | Mce family protein Mce1D | OCU_RS48865 |
Absent from M. yongonense group | Â | |
Derived strain (strain group) of hit cluster | Possible function | Homologous genes in ATCC13950 |
M021(MP-MIP) | mammalian cell entry protein | OCU_RS31630 |
M.i.27(TMI) | Mce family protein Mce3B | OCU_RS32530 |
M023(TMI) | mammalian cell entry protein | OCU_RS32545 |
M025(TMI) | Mce family protein Mce3D | OCU_RS31640 |
M025(TMI) | Mce associated membrane protein | OCU_RS32555 |
M026(TMI) | mammalian cell entry protein | OCU_RS31650 |
M028(TMI) | Mce family protein Mce3D | OCU_RS32540 |
M010(TMI) | Mce family protein Mce3C | OCU_RS32535 |
M017(MP-MIP) | Mce family protein Mce1D | OCU_RS48865 |
M017(MP-MIP) | mammalian cell entry protein | OCU_RS48860 |
M017(MP-MIP) | Mce associated protein | OCU_RS48840 |
M012(MP-MIP) | mammalian cell entry protein | OCU_RS32550 |
CSURP8077(TMI) | Mce family protein Mce1B | OCU_RS48875 |
CSURP8077(TMI) | Mce family protein Mce1C | OCU_RS48870 |
CSURP8077(TMI) | mammalian cell entry protein | OCU_RS48855 |
2285(TMI) | Mce family protein Mce3C | OCU_RS31635 |
1956(TMI) | MCE-family protein MCE3A | OCU_RS31625 |
FLAC0181(TMI) | Mce associated membrane protein | OCU_RS31655 |