Table 4 RpfG positively regulates the expression of 10 hrp genes, 8 T3S effectors
ID | Gene name | Predicted product | Fold change | p value |
|---|---|---|---|---|
XC3001 | hpa2 | Hpa2 protein | −0.460 | 0.014094188 |
XC3002 | hpa1 | Hpa1 protein | −0.794 | 1.9328E-05 |
XC3003 | hrcC | HrcC protein | −0.748 | 0.000323325 |
XC3004 | hrcT | HrpB8 protein | −0.819 | 0.007692677 |
XC3005 | hrpB7 | HrpB7 protein | −0.898 | 0.000925861 |
XC3006 | hrcN | HrpB6 protein | −0.866 | 0.001395029 |
XC3007 | hrpB5 | HrpB5 protein | −0.422 | 0.002457912 |
XC3008 | hrpB4 | HrpB4 protein | −0.604 | 0.000177562 |
XC3009 | hrcJ | HrcJ protein | −1.370 | 0.000105572 |
XC3010 | hrpB2 | HrpB2 protein | −1.189 | 0.000499769 |
XC3011 | hrpB1 | HrpB1 protein | −2.031 | 0.000552365 |
XC3012 | hrcU | HrcU protein | −1.364 | 1.2705E-05 |
XC3013 | hrcV | HrcV protein | −1.251 | 0.000455787 |
XC3014 | hpaP | HpaP protein | −1.270 | 0.000271481 |
XC3015 | hrcQ | HrcQ protein | −1.055 | 0.002525553 |
XC3016 | hrcR | HrcR protein | −0.969 | 0.003879682 |
XC3017 | hrcS | HrcS protein | −0.999 | 0.032254632 |
XC3018 | hpaA | HpaA protein | −0.511 | 0.000910631 |
XC3019 | hrpD5 | HrpD5 protein | −1.198 | 0.000505121 |
XC3020 | hrpD6 | HrpD6 protein | −1.141 | 0.000534484 |
XC3021 | hrpE | HrpE protein | −1.388 | 0.000719991 |
XC3022 | hpaB | HpaB protein | −0.589 | 0.000803494 |
XC3023 | hrpW | HrpW protein | −0.214 | 9.24647E-05 |
XC3024 |  | conserved hypothetical protein | −0.621 | 0.000308403 |
XC3025 | hrpF | HrpF protein | −2.360 | 0.000402749 |
XC3076 | hrpX | HrpX protein | 0.034 | 4.24498E-05 |
XC3077 | hrpG | HrpG protein | −0.105 | 0.000180844 |
XC0052 | avrBs2 | avirulence protein | 0.037 | 0.002116633 |
XC0241 | xopXccN | conserved hypothetical protein | −1.272 | 0.000227566 |
XC1553 | avrAC Xcc8004 | leucin rich protein | −0.942 | 0.000122936 |
XC2004 | avrXccC | avirulence protein | −1.352 | 0.00359996 |
XC2081 | avrBs1 | avirulence protein | −1.786 | 0.002769123 |
XC2602 | avrXccE1 | avirulence protein | −1.512 | 0.000120947 |
XC2994 | xopXccP | Type III effector protein | −0.970 | 0.001806466 |
XC2995 | xopXccE1 | Type III effector protein | −1.246 | 0.000429812 |
XC3160 | xopXccR1 | Type III effector protein | −2.452 | 0.000264107 |
XC3177 | xopXccQ | Type III effector protein | −2.164 | 0.001441317 |
XC3802 | avrXccB | avirulence protein | −0.562 | 0.002544406 |
XC4273 | xopXccLR | leucin rich protein | −1.251 | 0.000444297 |
XC0486 | clp | CAP-like protein | 0.199 | 0.000155663 |