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Table 1 Results of tests for the recombination based on Dnasp 4.0

From: Determining Clostridium difficile intra-taxa diversity by mining multilocus sequence typing databases

  Sk^2 Φ C/μ RM
Concatenated 3781.796 44.227 1.9147 119
adk 31.714 3.575 2.2387 12
atpA 28.769 4.034 1.5664 12
dxr 126.315 8.011 1.8696 18
glyA 157.289 8.791 1.9388 25
recA 100.98 6.306 2.4035 14
sodA 178.515 8.802 2.2128 25
tpi 25.33 4.709 0.966 9
  1. Sk^2: variance of the average number of nucleotide differences between pairs of sequences
  2. Φ: product of effective population size and neutral mutation rate per site
  3. C/μ: ratio between per-site recombination rate and per-site mutation rate
  4. RM: minimum number of recombination events in the history of the sample