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Table 1 Oligonucleotide primers used in this study

From: The PhoBR two-component system regulates antibiotic biosynthesis in Serratia in response to phosphate

Name

5'-3' sequence

Description

Restriction site

HS34

GCTGACTCATAAATATCTGACTG

pigA, primer extension oligo

 

HS36

GCGAAAATAGCTCGGCTGATCTC

smaI, primer extension oligo

 

HS60

GTCTATATCGGCATCTGTTCC

carA, primer extension oligo

 

KML

CCAGTAAGTTTTCCAGTAGGTGG

F primer for KmR gene of miniTn5 Km1

 

KMR

CCGAGCTTGGTACCCAGTC

R primer for KmR gene of miniTn5 Km1

 

NW225

GACCACACGTCGACTAGTGCNNNNNNNNNACTG

Random primed PCR primer 1

 

NW226

GACCACACGTCGACTAGTGCNNNNNNNNNATGAC

Random primed PCR primer 2

 

NW227

GACCACACGTCGACTAGTGCNNNNNNNNNGTCTC

Random primed PCR primer 3

 

NW244

CGTCTGCCAGGTGCTATTGGTTATG

pstSCAB region sequencing primer

 

NW245

GGATAACGAAGTGAACAGCAAC

pstSCAB region sequencing primer

 

NW246

GCATCCTGGCCGAGCATACAGAAG

pstSCAB region sequencing primer

 

NW247

GCGACGCATGCGGATAAGCTCTG

pstSCAB region sequencing primer

 

NW250

CATTACTGCGATGCACAATCAG

phoU sequencing primer

 

NW251

GTGACGATTGATGAAGCTTGTG

phoU sequencing primer

 

OTG124

ATCAGAGAATTCTACTAATTGGAGTCATTACCG

F primer for pTG27, smaI promoter construct

Eco RI

OTG125

ATCAGAAAGCTTAGTCTATCATTATAGCGTTCC

R primer for pTG27, smaI promoter construct

Hin dIII

PF42

GCATAAGCTTCCATCACTACTCC

R primer for pTA14, rap promoter construct

Hin dIII

PF43

GTAAGAATTCGCGATGTTCAGAAAC

F primer for pTA14, rap promoter construct

Eco RI

PF154

GATGAATTCAGGAGGACAGGGATGGCAAGACGTATTTTG

F primer for pTA74, PhoB expression construction

Eco RI

PF155

TCTAAGCTTCAGTAACGCGTCGAG

R primer for pTA74, PhoB expression construction

Hin dIII

PF180

TTTGAATTCGTTAGTTTGGGAGATTTTC

F primer for sequencing phoR

Eco RI

PF182

TTTAAGCTTGCTGCGGGACGC

R primer for sequencing phoR

Hin dIII

PHORL

GCGTTAGTTTGGGAGATTTTC

F phoR primer

 

PHORR

CTCCCAAACTAACGCTGTC

R phoR primer

 

PST1

CAGCGTCTGCCAGGTGC

pstS sequencing primer

 

PST2

GTCCACGTTGCTGAG

pstA sequencing primer

 

PST3

CCAGCTTTACCCAGAGCAACATG

pstB sequencing primer

 

PST4

CAGAGTGTAGTTTGCAGG

pstS sequencing primer

 

PST5

CGAGCAACAGCCAGTAG

pstA sequencing primer

 

PSTSLN

CAACAGGATAAAGGTAGTGGAGG

pstS sequencing primer

 

PSTSRN

CTGCACGGTCTTGGTCG

pstS sequencing primer

 

T3

CGCGCAATTAACCCTCACTAAAG

pBluescript II KS+ sequencing primer

 

T7

GCGCGTAATACGACTCACTATAG

pBluescript II KS+ sequencing primer

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