Table 1 List of 35 clinical isolates representing novel taxa and corresponding clinical data
ID Number | Species | Genbank Accession No. (BioSample): SAMEA | Origin of specimen | Clinical data | |||
|---|---|---|---|---|---|---|---|
Age(y)/sex | Clinical presentation | Relevant underlying disease | Clinical relevance | ||||
USB_NOVA_01 | Corynebacterium sp.nov | 111,563,050 | Swab toe | 61/m | Abscess formation | None | Not relevant |
USB_NOVA_02 | Corynebacterium sp.nov | 111,563,052 | Urine | 57/f | Urolithiasis | None | Not relevant |
USB_NOVA_03 | Corynebacterium sp.nov | 111,563,049 | Swab external auditory canal | 53/m | Acute otitis media due to Pseudomonas aeruginosa | Squamous cell carcinoma floor of mouth | Not relevant |
USB_NOVA_04 | Corynebacterium sp.nov | 111,563,047 | Blood culture | 55/m | Intoxication with drug of abuse | DM Typ 2 | Not relevant |
USB_NOVA_05 | Corynebacterium sp.nov | 111,563,048 | Blood culture | 68/m | Cholangitis | Hepatocellular carcinoma | Not relevant |
USB_NOVA_06 | Corynebacterium sp.nov | 111,563,051 | Urine | 48/m | Urolithiasis | None | Not relevant |
USB_NOVA_07 | Schaalia sp.nov. | 111,563,087 | Biopsy jaw | 90/f | Chronic osteomyelitis of the jaw/ MRONJ | Metastatic breast cancer | Unclear |
USB_NOVA_08 | Schaalia sp.nov. | 111,563,089 | Swab mouth | 65/f | SSI of the mouth and jaw | None | Not relevant |
USB_NOVA_09 | Schaalia sp.nov. | 111,563,086 | Biopsy submandibular | 61/f | Perimandibular abscess | None | Not relevant |
USB_NOVA_10 | Schaalia sp.nov. | 111,563,085 | Biopsy lung | 68/m | Pleural effusion after pleurodesis | Pleuramesothelioma | Unclear |
USB_NOVA_11 | Schaalia sp.nov. | 111,563,088 | Swab jaw | 61/f | Abscess fossa canina | None | Relevant |
USB_NOVA_12 | Anaerococcus sp.nov. | 111,563,038 | Biopsy bone toe | 88/f | Chronic polymicrobial osteomyelitis | Peripheral arterial occlusive disease | Relevant |
USB_NOVA_13 | Anaerococcus sp.nov. | 111,563,039 | Biopsy bone | 93/f | Implant associated infection of the tibia | None | Not relevant |
USB_NOVA_14 | Clostridium sp.nov. | 111,563,043 | Biopsy hand | 38/f | Soft tissue infection | None | Relevant |
USB_NOVA_15 | Clostridium sp.nov. | 111,563,042 | Blood culture | 41/m | Possible pneumococcal pneumonia | IVDU | Unclear |
USB_NOVA_16 | Desulfovibrio sp.nov. | 111,563,058 | Swab abdomen | 64/f | Teritiary peritonitis | Perforation of the rectum | Relevant |
USB_NOVA_17 | Desulfovibrio sp.nov. | 111,563,057 | Blood culture | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_18 | Peptoniphilus sp.nov. | 111,563,074 | Biopsy abdomen | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_19 | Peptoniphilus sp.nov | 111,563,073 | Biopsy upper leg | 52/m | Chronic soft tissue inflammation/fistula | DM Typ 2 | Unclear |
USB_NOVA_20 | Porphyromonas sp.nov | 111,563,075 | Abscess mamma | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_21 | Pusillimonas sp.nov | 111,563,082 | Swab external auditory canal | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_22 | Dermabacter sp.nov | 111,563,056 | Swab toe | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_23 | Helcococcus sp.nov. | 111,563,063 | Blood culture | 58/m | Spondylodiscitis due to Streptococcus dysgalactiae | IVDU | Unclear |
USB_NOVA_24 | Neisseria sp.nov. | 111,563,067 | Swab leg | 71/m | Soft tissue infection | Postoperative wound healing disorder and DM Typ 2 | Unclear |
USB_NOVA_25 | Pseudomonas sp.nov | 111,563,078 | Biopsy hand | 67/m | Open fracture | Traumatic amputation of the hand | Relevant |
USB_NOVA_26 | Pantoea sp.nov | 111,563,071 | Biopsy hand | 67/m | Open fracture | Traumatic amputation of the hand | Relevant |
USB_NOVA_27 | Lancefieldella sp.nov | 111,563,065 | Swab maxilla | 67/m | MRONJ | Metastatic prostata carcinoma | Not relevant |
USB_NOVA_28 | Rothia sp. nov. | 111,563,083 | Swab sacral | 26/m | Pilonidal cyst | None | Not relevant |
USB_NOVA_29 | Pseudoclavibacter sp.nov. | 111,563,077 | Swab external auditory canal | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_30 | Tessaracoccus sp.nov | 111,563,092 | Biopsy finger | N.a. | N.a. | N.a. | N.a. |
USB_NOVA_31 | Citrobacter sp.nov. | 111,563,041 | Swab rectal | N.a. | ESBL-screening | Leukemia | N.a. |
USB_NOVA_32 | Paenibacillus sp.nov | 111,563,069 | Aspirate pleura | 42/f | Pulmonary lesion, possible pulmonary fascioliasis | None | Not relevant |
USB_NOVA_33 | Ochrobactrum (Brucella) sp.nov | 111,563,040 | Bronchial secretion | 69/m | Multifactorial respiratory failure, aspiration | Lung cancer, COPD Gold III | Not relevant |
USB_NOVA_34 | Sneathia sp.nov | 111,563,091 | Swab pharynx | 23/m | Retropharyngeal abscess | None | Relevant |
USB_NOVA_35 | Psychrobacter sp.nov. | 111,563,081 | Blood culture | N.a. | N.a. | N.a. | N.a. |