Sequence Identifier (SRA)a | Strain | Description | ARGsb | Resistance of Interest | ARG Targetc | Reference |
---|---|---|---|---|---|---|
51299a | ATCC 51299 | Enterococcus faecalis | catA8, aph(3’)-IIIa, ant(6)-Ia, vanW-B, vanY-B, vanS-B, vanR-B, vanH-B, vanX-B, vanB, Isa(A), erm(B), dfrE, sat4 | Vancomycin | vanB | |
SRR25084145 | DT10023001 | Escherichia coli | tetB, tetA, sul1, sul2, sul3, qacEdelta1, mcr-1.1, blaTEM-1, aph(6)-Id, aph(3’)-Ia, aph(3’’)-Ib, addA2, blaEC-19, catA1, cmlA1, dfrA1, aadA1 (multiple copies) | Colistin | mcr-1.1 | This study |
SRR25084104 | OLC1107 | Klebsiella pneumoniae | blaCTX-M-15, oqxA10, blaSHV-148, fosA (multiple copies), oqxB | ESBL | blaCTX-M-15 | This study |
SRR10830862 | CFIAFB20160069 | Listeria monocytogenes | tetM, fosX, bcrABC | Tetracycline | tet(M) | [7] |
SRR10859129 | CFIAFB20130200 | Salmonella enterica ser. Heidelberg | blaCMY-2 | ESBL | blaCMY-2 | [37] |
SRR3053167 | Â | Beef fecal metagenome | aad9,aadA9,aadE,ant(6)-Ia,ant(6)-Ib,ant(9)-Ia,aph(3')-IIIa,blaACI-1,blaEC-18,cblA,cfr(C),cfxA_gen,cfxA6,cmx,erm(33),erm(A),erm(B),erm(C),erm(G),erm(Q),erm(T),erm(X),lnu(AN2),lnu(C),lnu(G),mef(A),mef(En2),mph(B),msr(D),sat4,spw,str,tcrB,tet(32),tet(33),tet(40),tet(44),tet(B),tet(C),tet(M),tet(O),tet(Q),tet(T),tet(W) | NA | [26] | |
SRR7414924 | Â | Lettuce metagenome | aac(2')-Ib,aac(2')-Ic,aac(3)-IV,aac(6')-Ie_fam,aacA-STR-10,aacA34,aadA11,aadA2,aadA6,ant(3'')-IIc,ant(6)-Ia,aph(3')-IIa,aph(4)-Ia,aph(6)-Id,aph(6)-Smalt,BcII,bla1,blaADC-151,blaCME-1,blaIND-9,blaL1,blaOXA-308,blaOXA-571,blaOXA-60,blaOXA-658,blaSPU-1,blaTEM-123,bleO,catA9,cfr-Cb,cipA,cmlR,cmx,erm(A),erm(X),erm(X),estDL136,floR,fosB_gen,fosB-251804940,lsa(B),mecI_of_mecC,mef(A),mgt,mphL,msr(D),oleD,oqxB12,oqxB16,otr(A),rgt1438,rox,rph,rphC,rphD,sul1,sul2,tet(C),tet(G),tet(O),tet(V),tetA(P),vanA-Pa,vanI,vanJ,vanK-Sc,vanM,vanO,vanR-A,vanR-O,vanS-O,vanX-Sc,vga(B) | NA | [41] |