Genome-wide transcriptional response to silver stress in extremely halophilic archaeon Haloferax alexandrinus DSM 27206 T

Table 4 Transcription rates of genes involved cellular motility^a

Hfx. alexandrinus DSM 27206 ORF^b	Gene name	Log₂FC			Annotation
Hfx. alexandrinus DSM 27206 ORF^b	Gene name	0.1 mM	0.25 mM	0.5 mM	Annotation
Hfx-2019-SC2-cds599	flaD/flaE	-	-	-2.02	Flagellar protein family
Hfx-2019-SC2-cds600	cheD	-	-	-2.03	Chemotaxis protein
Hfx-2019-SC2-cds602	cheY	-	-	-2.01	Two-component system chemotaxis family response regulator
Hfx-2019-SC2-cds605	flaB	-	-	-3.39	Archaeal flagellin
Hfx-2019-SC2-cds606	flaB	-	-	-3.33	Archaeal flagellin
Hfx-2019-SC2-cds616	cheF	-	-	-2.12	Chemotaxis protein
Hfx-2019-SC3-cds360	mcp	-	-	-2.32	Methyl-accepting chemotaxis protein

^aRNA-Seq was used to determine the expression levels of the genes in Hfx. alexandrinus DSM 27206, as detailed in the section on Materials and Methods. The data are the average of three replicates. The threshold of differential expression genes was: |log₂(FoldChange)|> 1 and qvalue < 0.00. Dashes indicate that there were minimal changes to the transcription, not considered statistically significant. ^bThe gene name, number, and annotation were generated through the gDNA sequencing of the tested strain, as described in the Materials and Methods section

ISSN: 1471-2180