Table 1 Proteins sharing structural folds with the putative attacin, Hill_BB_C10074
PDB entry-Chain | Z score | rmsd | %id | PDB Description | Source organism | Stoichiometry | Membrane protein? |
|---|---|---|---|---|---|---|---|
6h04-I | 7.2 | 23.2 | 3 | Complement component C9 | Homo sapiens | Hetero 24-mer | Yes |
5fq6-M | 6.5 | 15.6 | 11 | Putative lipoprotein | Bacteroides thetaiotaomicron | Hetero 8-mer | Yes |
5dl5-A | 6.3 | 11.5 | 8 | Membrane protein | Acinetobacter baummanii | Monomer | Yes |
4pr7-A | 6.2 | 2.9 | 11 | Oligogalacturonate-specific porin | Dickeya dadantii | Monomer | Yes |
6zlt-B | 6.2 | 14.6 | 10 | SusD homolog | B. thetaiotaomicron | Hetero 4-mer | Yes |
4c00-A | 6.1 | 11.8 | 8 | Translocation and assembly module | E. coli | Monomer | Yes |
2gsk-A | 6.1 | 10.1 | 11 | Vitamin B12 transporter BtuB | E. coli | Hetero 2-mer | Yes |
4epa-A | 6.1 | 13.4 | 12 | Pesitcin receptor | Yersinia pestis | Monomer | Yes |
1wzn-A | 5.8 | 12.2 | 7 | Sam-dependent methyltransferase | Pyrococcus Hiroshii | Homo 6-mer | Unknown |
2w4y-A | 5.8 | 4.6 | 3 | Caulobacter 5 virus-like particle | Unclassified Emesvirus | Homo 180-mer | No |