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Table 2 Acid-resistance proteins found on the genome of CEC15 and EcN

From: Comprehensive probiogenomics analysis of the commensal Escherichia coli CEC15 as a potential probiotic strain

Locus tag

Gene

Product

CEC15_000207

EcN_000211

gadA

glutamate decarboxylase

CEC15_000208

EcN_000212

gadX

acid resistance transcriptional activator GadX

CEC15_000213

EcN_000217

gadE

acid resistance transcriptional activator GadE

CEC15_000215

EcN_000219

hdeA

acid-activated periplasmic chaperone HdeA

CEC15_000216

EcN_000220

hdeB

acid-activated periplasmic chaperone HdeB

CEC15_000474

EcN_000513

yhcN

peroxide/acid stress response protein YhcN

CEC15_001489

EcN_001445

oxc

oxalyl-CoA decarboxylase

CEC15_001491

EcN_001447

yfdE

CoA:oxalate CoA-transferase

CEC15_001977

yodD

peroxide/acid resistance protein YodD

CEC15_002333

EcN_002372

asr

acid resistance repetitive basic protein Asr

CEC15_002338

EcN_002377

clcB

voltage-gated ClC-type chloride channel ClcB

CEC15_002404

EcN_002437

ydeO

acid stress response transcriptional regulator YdeO

CEC15_002411

EcN_002444

gadB

glutamate decarboxylase

CEC15_002412

EcN_002445

gadC

acid resistance gamma-aminobutyrate antiporter GadC

CEC15_002520

EcN_002529

ldhA

D-lactate dehydrogenase

CEC15_002734

EcN_002690

ychM

C4-dicarboxylic acid transporter DauA

CEC15_002784

EcN_002738

ariR

biofilm/acid-resistance regulator AriR

CEC15_002800

EcN_002809

phoQ

two-component system sensor histidine kinase PhoQ

CEC15_002870

yceO

YceO family protein

CEC15_002912

EcN_003035

ymdF

general stress protein

CEC15_003598

EcN_003686

yagU

YagU family protein

CEC15_003764

EcN_003863

clcA

H(+)/Cl(-) exchange transporter ClcA

CEC15_004198

EcN_004368

adiC

arginine/agmatine antiporter

CEC15_004546

EcN_004770

ilvD

dihydroxy-acid dehydratase

CEC15_001098

EcN_001127

rpoS

RNA polymerase sigma factor RpoS