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Fig. 1 | BMC Microbiology

Fig. 1

From: Increased bacterial taxonomic and functional diversity is associated with impaired rotavirus vaccine immunogenicity in infants from India and Malawi

Fig. 1

Geographic discrepancies in taxonomic and functional composition of the microbiome. A Comparison of feature richness for each data module. Groups were compared by Wilcoxon rank-sum test. B Cross-validation accuracy of Random Forests for prediction of country. Median out-of-bag accuracy (proportion correctly assigned) and interquartile range across 20 iterations of fivefold cross-validation are displayed. A random subset of 50 samples per country was used for each iteration. C The 10 most important genera selected by Random Forests for discriminating infants by country. D Volcano plots for feature enrichment by country. CV, cross-validation; EC, enzyme commission; FDR, false discovery rate; IND, India; MLW, Malawi; n.s., not significant; *** p < 0.0005

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BMC Microbiology

ISSN: 1471-2180

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