Skip to main content

Table 3 Molecular docking of Aspergillus sp. SA1, Aspergillus sp. SA2, and Aspergillus sp. SA3 compound within fungal sterol CYP51 (PDB ID: 1EA1) and bacterial DNA gyrase (PDB ID: 5BTC)

From: Phytochemical analysis and anti-infective potential of fungal endophytes isolated from Nigella sativa seeds

#

Molecule

Fungal Cyp51 (1EA1)

Bacterial DNA Gyrase

(5BTC)

S (Kcal/mol)

RMSD (Å)

S (Kcal/mol)

RMSD (Å)

Ref.

Fluconazole

-5.34

1.77

NA

NA

Ciprofloxacin (CFP)

NA

NA

-12.87

0.96

Aspergillus sp. SA1

 1

3,4,5-Trihydroxy-1-tetralone

-4.38

1.62

-2.68

1.04

 2

Dibutyl phthalate

-4.89

1.19

-7.00

1.49

 3

Penicitide B

-5.88

1.45

0

0

 4

Plastoquinone-3

-7.28

0.83

-3.04

1.47

 5

Secocitreoanthrasteroid

-5.60

1.31

-2.79

2.36

 6

Janthinolide A

-6.92

1.45

-0.76

2.45

 7

Austinoneol A

-5.91

0.58

0

0

Aspergillus sp. SA2

 8

R-Mellein

-4.69

1.38

-6.15

1.34

 9

Aspinonene

-4.87

1.59

-3.69

1.10

 10

Nidulol

-4.64

1.49

-4.39

0.97

 11

Circumdatin G

-5.43

1.69

-4.43

2.29

 12

2-Hydroxycircumdatin C

-5.67

1.62

-3.77

1.08

 13

Avrainvillamide

NA

NA

NA

NA

 14

Notoamide B

-6.43

0.66

0

0

 15

Notoamide G

NA

NA

NA

NA

 16

Spirotryprostatin C

-7.51

1.09

-4.61

2.52

 17

Novofumigatamide

-5.77

0.98

0

0

Aspergillus sp. SA3

 18

Reticulone

-5.29

0.55

-4.94

1.41

 19

Emodin

-5.60

0.94

-6.41

0.86

 20

Sydowinin A

-6.30

0.89

-7.79

0.99

 21

O-Methylviriditin

-5.65

1.11

-8.97

2.05

 22

GERI-BP002-A

-7.19

1.06

-5.39

1.30

 23

(-)-Averantin

-6.24

1.16

-5.92

1.47

 24

Circumdatin J

-6.53

1.25

-4.76

0.62

 25

Circumdatin D

-5.77

0.64

-5.05

1.14

 26

Notoamide L

NA

NA

NA

NA