Fig. 2
From: Diagnosis of Crohn’s disease and ulcerative colitis using the microbiome
Diversity and distribution of microbiomes in CD subgroups. A Measurement of the Chao1 index of community richness. B PCoA showing differences in microbial composition by the Bray–Curtis index. C, D, E Taxonomic composition of the gut microbiome in the levels of CD-active group at the phylum (C), genus (D), and species (E). F Difference in microbial abundances between HC and CD (FDR < = 0.05, |log2FC|> = 1). G TSEA network modules displayed by TSEA. H The TSEA results show 17 host-intrinsic terms (p < = 0.05). I Comparison of the microbial composition between mild and moderate (p < = 0.001, absolute log2FC > = 1) at the species level. J Signatures of the gut microbiota related to CD activity. Box plots represent the median and interquartile range. The significances are represented as follows: ****p < = 0.0001; ***p < = 0.001; **p < = 0.01; *p < = 0.05; and ns, p > 0.05