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Table 5 Analysis of the influence of fatty acid metabolism gene mutations on cross-regional

From: Association between fatty acid metabolism gene mutations and Mycobacterium tuberculosis transmission revealed by whole genome sequencing

Gene

Position

Type

Reference

Variant

P Value

OR (95% CI)

ppiA

12,555

snp

C

T

1.000

 

fadD34

37,305

snp

C

G

1.000

 

fadD34

37,334

snp

A

T

0.999

 

fadD34

37,553

ins

T

TTCATGACTCGG

CTCGGCCCAC

0.5

1.689(0.368–7.743)

fadD34

37,971

snp

G

C

0.443

1.518(0.523–4.406)

fadD34

38,199

snp

C

T

0.999

0.000

gca

136,605

snp

G

C

1.000

1.000

lipC

262,829

snp

C

T

0.087

3.095(0.848–11.293)

clpB

460,413

snp

C

T

0.998

0.000

fgd1

491,556

snp

G

A

0.999

 

fgd1

491,742

snp

T

C

1.000

 

pepC

893,733

snp

T

G

0.272

0.481(0.13–1.776)

far

951,702

snp

C

T

0.997

 

fadB

957,117

snp

T

C

1.000

 

ercc3

958,607

snp

G

A

0.948

1.032(0.398–2.676)

ercc3

959,167

snp

C

T

1.000

1.000

fadH

1,306,259

snp

A

G

0.999

 

fadH

1,306,322

snp

C

G

1.000

1.000

fadH

1,307,598

snp

C

G

1.000

 

ogt

1,477,346

snp

C

G

0.015

0.136(0.028–0.674)

ogt

1,477,522

snp

C

A

0.999

 

lipI

1,576,481

snp

T

G

1.000

 

lipI

1,576,527

snp

G

T

0.999

0.000

inhA

1,674,210

snp

A

C

0.999

0.000

rpsA

1,834,177

snp

A

C

1.000

0.000

rpsA

1,834,776

snp

C

T

0.998

0.000

tlyA

1,917,972

snp

A

G

0.999

 

lipJ

2,147,022

snp

A

C

0.999

 

helZ

2,361,311

snp

C

T

1.000

0.000

helZ

2,361,604

snp

C

G

0.503

2.581(0.161–41.285)

fadD15

2,449,629

snp

G

A

0.999

0.000

acpS

2,839,689

snp

C

T

0.019

0.467(0.247–0.88)

fas

2,841,022

snp

A

G

0.716

0.654(0.066–6.436)

fas

2,847,281

snp

A

G

1.000

 

relA

2,908,252

snp

G

A

5.175e-5

0.013(0.002–0.108)

arsA

3,001,498

snp

C

G

8.681e-5

6.278(2.508–15.711)

mtr

3,165,636

snp

G

A

0.998

0.000

tesA

3,242,617

snp

C

T

0.001

0.059(0.011–0.302)

gatB

3,367,765

snp

G

A

1.000

1.000

cstA

3,428,183

snp

G

A

0.221

0.691(0.383–1.248)

cstA

3,428,917

snp

C

A

0.999

 

agpS

3,476,350

snp

G

A

0.999

0.000

nudC

3,571,828

snp

G

C

1.000

 

sdhD

3,704,770

snp

A

G

0.999

 

nagA

3,719,723

snp

A

C

0.112

0.259(0.049–1.372)

lipF

3,906,311

snp

G

A

0.999

0.000

acs

4,108,495

snp

G

A

0.073

0.38(0.132–1.094)

acs

4,109,342

snp

G

A

0.147

0.619(0.323–1.184)

crp

4,116,610

snp

G

A

0.998

 

crp

4,116,773

snp

T

C

0.999

 

pcnA

4,392,373

snp

G

A

0.998

 
  1. OR, Odds ratio; CI, confidence interval
  2. -means there is no result in statistical software or the result was too large and nonsense
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BMC Microbiology

ISSN: 1471-2180

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