Association between fatty acid metabolism gene mutations and Mycobacterium tuberculosis transmission revealed by whole genome sequencing

Table 4 Analysis of the effect of fatty acid metabolism gene mutations on clustering of lineage 4

Gene	Position	Type	Reference	Variant	P Value	OR (95% CI)
fadD34	37,553	ins	T	TTCATGACTCG GCTCGGCCCAC	0.859	1.07(0.504–2.273)
pepC	893,733	snp	T	G	0.999	0.000
pepC	893,895	snp	C	T	1.000
fadB	957,117	snp	T	C	1.000
ercc3	959,167	snp	C	T	0.584	1.426(0.4-5.078)
fadH	1,306,322	snp	C	G	0.94	1.048(0.31–3.539)
fadH	1,306,796	snp	G	A	0.488	1.812(0.337–9.734)
fadH	1,307,598	snp	C	G	1.000
tkt	1,630,148	snp	A	C	0.999	0.000
lipJ	2,147,022	snp	A	C	1.000
helZ	2,361,311	snp	C	T	1.000
helZ	2,361,604	snp	C	G	0.781	0.67(0.04-11.224)
helZ	2,362,041	snp	C	A	0.999
dlaT	2,482,888	snp	G	A	1.000
acpS	2,839,689	snp	C	T	1.000	0.000
gatB	3,367,765	snp	G	A	1.000	0.000
cstA	3,428,917	snp	C	A	0.999	0.000
sdhD	3,704,686	snp	T	C	0.999
nagA	3,719,723	snp	A	C	0.562	0.62(0.123–3.13)
crp	4,116,773	snp	T	C	0.999	0.000
pcnA	4,392,373	snp	G	A	0.923	0.96(0.415–2.222)

OR, Odds ratio; CI, confidence interval
-means there is no result in statistical software or the result was too large and nonsense

ISSN: 1471-2180