Table 1 Selected sequences related to variants of SARS-CoV-2 for multiple alignments
Variants | Lineage | Synonyms | Origin /Date | Selected Sequences |
|---|---|---|---|---|
Reference | 19 A | Wuhan-Hu-1, nCoV | China/ Dec 2019 | 40,000 |
Variant of concern (VOC) | Alpha | B.1.1.7 | United Kingdom/ December 2020 | 200 |
Beta | B.1.351, B.1.351.2, B.1.351.3 | South Africa/ December 2020 | 200 | |
Gama | P.1, B.1.1.28.1, P.1.1,P.1.2 | Brazil/ January 2021 | 200 | |
Delta | B.1.617.2, AY.1, 2 | India/ May 2021 | 200 | |
Omicron BA.1 | BA.1 | South Africa/ Dec 2021 | 200 | |
Omicron BA.2 | BA.2 | South Africa/ Dec 2021 | 200 | |
Omicron BA.3 | BA.3 | South Africa/ Dec 2021 | 78 | |
Omicron BA.4 | BA.4 | South Africa, Jan 2022 | 200 | |
Omicron BA.5 | BA.5 | South Africa, Jan 2022 | 200 | |
Variant of Interest (VOI) | Epsilon | B.1.427, B.1.429 | California/ July 2020 | 200 |
Zeta | P.2, B.1.1.28.2 | Brazil/ Oct 2020 | 200 | |
Eta | B.1.525, | United Kingdom/Nigeria December 2020 | 200 | |
Theta | P.3, B.1.1.28.3 | Philippines/ January 2021 | 42 | |
Iota | B.1.526, 21 F | United States/ November 2020 | 200 | |
Kappa | B.1.617.1 | India/ December 2020 | 200 | |
Lambda | C.37, B.1.1.1.C37 | Peru/ August 2020 | 200 |