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Table 5 Deduced amino acid differences of AMV isolates, including the present isolates

From: Molecular characterization and evolution of the resident population of some alfalfa mosaic virus (AMV) isolates in Egypt

Groups

Isolates name

Amino acids position

 

29

30

34

36

66

92

93

117

132

134

136

175

GP I

AM1

Q

S

T

N

F

V

Y

E

Q

A

R

V

AM2

Q

S

T

N

F

V

Y

E

Q

A

R

V

AM3

Q

S

T

N

F

V

Y

E

Q

A

R

V

AM4

Q

S

T

N

F

V

Y

E

Q

A

R

V

Gomchi

Q

S

T

N

F

V

Y

E

Q

A

R

V

Shark

Q

S

T

N

F

V

Y

E

Q

A

R

V

M3

Q

S

T

N

F

V

Y

E

Q

A

R

V

M123

L

P

T

N

F

V

Y

E

Q

A

R

V

EM99

Q

S

T

N

F

V

Y

E

Q

A

R

V

EM143

Q

S

T

N

F

V

Y

E

Q

A

R

V

AMV-EG

Q

P

T

K

F

V

Y

E

Q

A

H

V

AMV77

Q

S

T

K

F

V

Y

E

Q

A

R

V

GPII

Lye_80

L

P

A

K

S

I

F

D

H

A

H

L

Caa_1

L

P

A

K

S

I

F

D

H

I

H

L

Dac 16

L

P

A

K

S

I

F

D

H

I

H

L

AMV-Mexico

L

P

A

K

S

V

F

D

Q

A

H

L

AMV-Basil

Q

P

A

K

S

V

F

D

Q

A

H

L

VRU

L

P

A

K

S

I

F

D

H

A

H

L

GPIII

126A

L

P

A

K

F

I

Y

D

Q

V

H

Q

195_AN

L

P

A

K

F

I

Y

D

Q

V

H

Q

F430

L

P

A

K

F

I

Y

D

Q

V

H

Q

Brazil

L

P

A

K

F

I

Y

D

Q

V

H

Q

AMV 425 L

L

P

A

K

F

I

Y

D

H

A

H

Q

Fa.Fa.A

L

P

A

K

F

I

Y

D

H

A

H

Q

Ke.Ji.PO

L

P

A

K

F

I

Y

D

H

A

H

Q

NZ34

L

P

A

K

F

I

Y

D

H

A

H

Q

WC3(cp)

L

P

A

V

F

I

Y

D

Q

V

H

Q

95–08

L

P

A

K

F

I

Y

D

Q

V

H

Q

strain S

L

P

A

K

F

I

Y

D

H

A

H

Q

KR1

L

P

A

K

F

I

Y

D

Q

A

H

Q

GPIV

Wadi- aldawasir

L

P

A

K

S

I

Y

D

H

D

H

L

AMV-TA1

L

P

A

K

S

I

Y

D

H

D

H

L

  1. Amino acids characterizing group (GPI) and Egyptian isolates are written in bold text