Table 1 AMR genotype–phenotype concordance for six drugs
Drug | Test | Genes | GR/ PR | GS/ PR | GR/ PS | GS/ PS | SN | SP |
|---|---|---|---|---|---|---|---|---|
CPFV | Both | oqxA; oqxB*,qnrB | 9 | 0 | 0 | 0 | 1.00 | NA |
T/S | Both | sul1 or sul2. dfrA* | 6 | 0 | 0 | 3 | 1.00 | 1.00 |
GEN | Both | aac(3)-IIe | 6 | 0 | 0 | 3 | 1.00 | 1.00 |
FEP | Both | blaCTX-M | 6 | 0 | 0 | 3 | 1.00 | 1.00 |
ETP | ETEST | blaKPC* | 2 | 5 | 0 | 2 | 0.29 | 1.00 |
MEM | ETEST | blaKPC* | 2 | 2 | 0 | 5 | 0.50 | 1.00 |
ETP | ETEST | blaKPC*, blaCTX-M | 6 | 1 | 0 | 2 | 0.86 | 1.00 |
ETP | MicroScan | blaKPC* | 2 | 7 | 0 | 0 | 0.22 | NA |
MEM | MicroScan | blaKPC* | 2 | 7 | 0 | 0 | 0.22 | NA |
ETP | MicroScan | blaKPC*, blaCTX-M | 6 | 3 | 0 | 0 | 0.67 | NA |