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Table 1 Sample sequencing sequence statistics

From: The 16S rDNA high-throughput sequencing correlation analysis of milk and gut microbial communities in mastitis Holstein cows

Sample ID

Raw Data

Clean Data

Effective Data

Ratio

Sample ID

Raw Data

Clean Data

Effective Data

Ratio

MM.1

69,710

66,361

60,232

64.65

MF.3

91,861

88,075

67,323

70.86

MM.2

47,335

45,136

41,343

62.97

MF.4

79,534

76,336

55,887

67.80

MM.3

50,665

48,364

44,822

64.74

MF.5

88,669

84,807

84,807

66.39

MM.4

82,296

77,398

69,508

61.78

MF.6

84,045

79,338

58,034

65.24

MM.5

58,026

54,873

48,950

64.12

NF.1

90,650

86,444

60,664

64.33

NM.1

80,360

75,770

61,351

63.26

NF.2

83,651

78,372

55,769

62.62

NM.2

53,832

50,780

43,882

60.41

NF.3

94,714

90,324

65,421

66.41

NM.4

76,889

74,499

61,577

59.77

NF.4

95,472

91,285

67,102

67.46

MF.1

85,504

81,161

59,163

65.83

NF.5

88,536

84,190

62,193

67.05

MF.2

88,440

84,523

63,718

69.16

NF.6

90,308

85,789

59,850

63.12

  1. Raw data refers to splice sequence date, Clean data is the sequence after filtering low quality and short length, Effective data is the sequence after filtering chimeras into later data analysis