Fig. 3
From: Validation of a batch cultivation protocol for fecal microbiota of Kenyan infants
Microbiota composition of fresh feces and after 24 h of fecal batch fermentation based on 16S rRNA gene amplicon sequencing data. Relative abundance on genus level (“other” <1%) (A). PCoA and total distance of binary and weighted Jaccard comparing fecal and fermentation samples of infant 01 to 06 (B) and 07 to 10 (C). Distance of 0 indicates identical communities and distance of 1 indicates different communities. The initial pH of the batch cultivation medium is indicated. The numbers assigned to bars and symbols denote the infant. Averages of technical duplicates are shown for the relative abundance and total distance data