Table 2 Summary of the intrinsic and acquired resistance genes, transporter genes and plasmid replicons in 48 Salmonella enterica strains from Nigeria
Strain ID | Serotype | Source | Intrinsic genes | Acquired genes/Transporters | Plasmid replicon |
|---|---|---|---|---|---|
19CS0255 | Senftenberg | Animal (cattle) | aac.6…Iaa/mdf(A) | sinH, mdsB. mdsA, golT, golS, pcoE,pcoS, pocR, pcoD, pcoC, pcoB, pcoA,silP,silA,silB,silF,silC,silR,silS,silE | - |
19CS0257 | Abony | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0290 | Abony | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0294 | Abony | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0295 | Abony | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0250 | Cotham | Animal (poultry) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0263 | Cotham | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0267 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0269 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0271 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0272 | Cotham | Animal (cattle) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0274 | Cotham | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0275 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0277 | Cotham | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0278 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0279 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0283 | Cotham | Animal (poultry) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0284 | Cotham | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0285 | Cotham | Animal (poultry) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0288 | Cotham | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0291 | Cotham | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0292 | Cotham | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0245 | Give | anderes Resistogramm | aac.6…Iaa/mdf(A) | qnrB, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0246 | Give | Animal (cattle) | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0247 | Give | Animal (poultry) | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0248 | Give | Sewage/wastewater | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0249 | Give | Sewage/wastewater | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0251 | Give | Animal (poultry) | aac.6…Iaa/mdf(A) | qnrB, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0259 | Give | Animal (cattle) | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0260 | Give | Animal (cattle) | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0261 | Give | Animal (cattle) | aac.6…Iaa/mdf(A) | qnrB, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0262 | Give | Animal (cattle) | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0264 | Give | Human | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0266 | Give | Human | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0268 | Give | Human | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0280 | Give | Human | aac.6…Iaa/mdf(A) | qnrB, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0289 | Give | Human | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0293 | Give | Human | aac.6…Iaa/mdf(A) | qnrB19, sinH, mdsB, mdsA, golT, golS | Col440I_1 |
19CS0270 | Mokola | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0273 | Mokola | Animal (poultry) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0276 | Mokola | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0281 | Mokola | Animal (cattle) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0282 | Mokola | Animal (cattle) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0287 | Mokola | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | - |
19CS0253 | Typhimurium | Sewage/wastewater | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | incFIB.B/incFII.S |
19CS0256 | Typhimurium | Animal (cattle) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | incFIB.B/incFII.S |
19CS0258 | Typhimurium | Human | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | incFIB.B/incFII.S |
19CS0286 | Typhimurium | Animal (poultry) | aac.6…Iaa/mdf(A) | sinH, mdsB, mdsA, golT, golS | incFIB.B/incFII.S |