Fig. 2
From: Exploration of lung mycobiome in the patients with non-small-cell lung cancer
Networks of co-occurrence fungi across two groups. (A) The relative abundance of each fungi is used to construct the co-occurrence networks by sparcc method. Only the nodes with correlation coefficient (r > 0.8 or r <  − 0.8 significant at p < 0.05) are considered. The nodes are colored according to phylum. Green edges represent positive correlations and red edges represent negative correlations. Node size is proportional to the betweenness centrality of each species, and edge thickness is proportional to the weight of each correlation. (B) UMAP analysis shows each node status from NSCLC to Non-NSCLC. The two plots show different nodes in NSCLC and the Non-NSCLC networks from left to right, which paired to Fig. 2A. Interactive node means the node of which degree is not zero. (C) The network parameter is calculated in two networks. Total degree is the sum of edges on each node, representing the number of other nodes (species) in the network which are connected with the given node. Diameter is the largest distance between two nodes in a network. Clustering coefficient shows the extent by which a node is connected to its neighbors. Path length represents the nearest distance between two nodes