Table 1 Property of the MLST loci in A baumannii in this study
Locus | No. of nucleotide analyzed | No. of alleles | No. of SNP | SNP Frequency | No. of variable sites | Nucleotide diversity π | Sequence diversity rate |
|---|---|---|---|---|---|---|---|
Oxf_gltA | 484 | 5 | 5 | 1.03% | 5 | 0.00413 | 2.98% |
Oxf_gyrB | 457 | 10 | 20 | 4.38% | 19 | 0.01255 | 3.92% |
Oxf_gdhB | 344 | 10 | 20 | 5.81% | 20 | 0.01628 | 3.73% |
Oxf_recA | 371 | 11 | 63 | 16.98% | 60 | 0.03514 | 6.40% |
Oxf_cpn60 | 421 | 7 | 11 | 2.61% | 11 | 0.00882 | 3.87% |
Oxf_gpi | 305 | 14 | 48 | 15.74% | 44 | 0.03967 | 3.38% |
Oxf_rpoD | 513 | 7 | 6 | 1.17% | 6 | 0.00464 | 3.29% |