Fig. 4

Visualization of the cellular microbiome profile. (Left) Standard display (first brain sequence read archive listed in the supplementary material) generated with Morpheus where the number of matches for the 1000+ probes in a constant order A–H (Center) are colored such that blue = 0, white = lower cutoff (generally any value >0) and red ≥ upper bound (differs between experiments). All values are normalized to the number of host cells determined by readcounts for two housekeeping genes. (Right) Magnification of the B2–B4 region showing matches for individual probes