Fig. 5

Sequence comparison between pTiAB2/73 and various Ti, Ri, Sym and At plasmids. BLASTn hits are shown in concentric rings, from inner to outer ring: agropine Ri plasmid pRi1855 (accession CP044124), mannopine Ri plasmid pRi8196 (accession NZ_JAAMDI010000041.1), cucumopine Ri plasmid pRi2659 (accession NZ_CP019703), mikimopine Ri plasmid pRi1724 (accession NC_002575), octopine Ti plasmid pTiAch5 (accession NZ_CP007228), agropine Ti plasmid pTiBo542 (accession NC_010929), chrysopine Ti plasmid pTiChry5 (accession KX388536), nopaline Ti plasmid pTiC58 (accession NC_003065), succinamopine Ti plasmid pTiEU6 (accession KX388535), Ti plasmid pTiCFBP5473 (accession NZ_CP039694, from Agrobacterium larrymoorei), Ti plasmid pTiCFBP4996 (accession NZ_CM016551, mega Ti plasmid), Ti plasmid pTiCFBP5477 (accession NZ_CM016547, from A. larrymoorei), Ti plasmid pTiK306 (accession NZ_JABFNP010000003, from A. vitis), vitopine/ridéopine Ti plasmid pTiS4 (NC_011982, from A. vitis), Sym plasmid pPR19E03 (accession NZ_CP054030, from Rhizobium hidalgonense strain JKLM 19E), Sym plasmid pPR12A203 (accession NZ_CP054024, from Rhizobium indicum strain JKLM 12A2), plasmid pAtCFBP7129b (accession NZ_CP039925). Color intensity indicates the degree of sequence similarity. The second-last ring shows predicted coding sequences and in the outermost ring a number of areas and genes are indicated