|
Attribute
|
Value
|
% of totala
|
|---|
|
Genome size (bp)
|
3,930,779
|
100.00
|
|
DNA coding region (bp)
|
3,380,475
|
86.00
|
|
DNA G + C (bp)
|
1,631,417
|
47.15
|
|
DNA scaffolds
|
10
|
–
|
|
Total genes
|
3998
|
100.00
|
|
Protein coding genes
|
3835
|
95.92
|
|
RNA gene
|
101
|
2.53
|
|
Pseudo genes
|
62
|
1.55
|
|
Gene with function prediction
|
3258
| |
|
Genes assigned to COGs
|
2765
|
69.16
|
|
Genes assigned Pfam domains
|
10
|
0.25
|
|
Genes with signal peptides
|
169
|
4.23
|
|
Genes with transmembrane helices
|
1123
|
28.09
|
|
CRISPR repeats
|
219
|
5.45
|
- aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
