Table 2 Genes significantly up- and down-regulated (│Ratio(log2)│ > 1) in auto-aggregating compared to non-aggregation strains*
ORF | Product | Ratio (log2) | ||
|---|---|---|---|---|
PA4_02a) | IA01t0b) | IA01t0c) | ||
Upregulated | ||||
 LP_RS05230 | MarR family transcriptional regulator | −5.17 | −4.54 | − 5.37 |
 LP_RS05225 | MucBP domain-containing protein | −4.23 | −4.10 | − 4.42 |
 LP_RS02885 | Hypothetical protein | −2.17 | −1.54 | −1.25 |
 LP_RS10335 | DUF4355 domain-containing protein | −2.04 | −1.53 | −1.29 |
 LP_RS02870 | DUF4355 domain-containing protein | −1.90 | −1.18 | − 1.22 |
 LP_RS10300 | Hypothetical protein | −1.55 | −1.03 | − 1.07 |
 LP_RS14830 | HAD family hydrolase | −1.52 | −1.11 | − 1.28 |
 LP_RS10310 | DUF3168 domain-containing protein | −1.49 | −1.58 | − 1.20 |
Downregulated | ||||
 LP_RS01470 | Hypothetical protein | 1.05 | 1.27 | 1.22 |
 LP_RS00795 | Cna B-type domain-containing protein | 1.08 | 1.02 | 1.04 |