Sample No. | Sampling source  type | qPCR (copies/m3) | qPCR with amoebic co-culture (copies/m3) | No. of reads assigned to: | Total | Number of clean  sequences | Detection rate of Legionella species (%) | |||
---|---|---|---|---|---|---|---|---|---|---|
L. birminghamensis | L. geestiana | L. nautarum | L. pneumophila | |||||||
22 | Road | 161.6 | 0.0 | 0 | 0 | 0 | 31 | 31 | 33,964 | 0.09 |
35 | Road | 245.7 | 15.8 | 0 | 33 | 0 | 0 | 33 | 185,688 | 0.02 |
86 | Road | 6.3 | 0.0 | 0 | 0 | 0 | 122 | 122 | 114,647 | 0.11 |
98 | Bathroom | 65.7 | 0.0 | 0 | 0 | 0 | 165 | 165 | 112,066 | 0.15 |
107 | Road | 365.0 | 67.7 | 1743 | 0 | 0 | 0 | 1743 | 215,097 | 0.81 |
159 | Indoor site | 72.1 | Not tested | 0 | 0 | 400 | 0 | 400 | 50,889 | 0.79 |