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Fig. 2 | BMC Microbiology

Fig. 2

From: Whole genome sequencing identifies an allele responsible for clear vs. turbid plaque morphology in a Mycobacteriophage

Fig. 2

Maximum Likelihood phylogeny of BGlluviae Gene_43 Immunity Repressor with homologous Repressor proteins from other viral taxa. Maximum likelihood phylogeny built using the LG + G4 model of protein substitution with Gamma shape parameter α = 0.1. The Nearest Neighbor Interchange heuristic search option was used to search for the tree with the highest log likelihood, shown here (− 5638.001). Support for the tree was assessed using 1000 Ultrafast pseudoreplicates implemented in IQ-TREE (Trifinopoulos et al., 2016). Branch lengths are measured in the number of substitutions per site

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BMC Microbiology

ISSN: 1471-2180

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