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Table 2 Microbiological results concerning the search for S. pneumoniae on the 196 samples of the study

From: Strategy using a new antigenic test for rapid diagnosis of Streptococcus pneumoniae infection in respiratory samples from children consulting at hospital

Microbiological tests

Number of positive (%)

Semi-quantitative culture

70 (35.7)

 - <  107 CFU/ml

20 (10.2)

 - ≥ 107 CFU/ml

50 (25.5)

Positive PCR tests (ply and/or lytA)

169 (86.2)

 - ply gene

167 (85.2)

  • Ct < 22a

63 (32.1)

  • Ct ≥ 22

104 (53.1)

 - lytA gene

123 (62.7)

  • Ct < 23a

32 (16.3)

  • Ct ≥ 23

91 (46.4)

Positive PneumoResp RDT

 - undiluted sample

133 (67.8)

 - 1:100 diluted sample

76 (38.7)

  1. Ct cycle threshold
  2. aThese thresholds were shown to correspond to approximately 107 CFU/ml by qPCR for the considered PCR assay (see Fig. 1)