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Table 1 Table of isolate characteristics

From: Phenotypic and genotypic characterization of clinical Staphylococcus aureus isolates from Kenya

  Isolate ID Clonal complex ST spa type SSC mec REGION CAI/HAIb IP/OP
MRSA SAKEN001 8 241 37 SCC mec _type_III (3A) Kisumu CAI In-patient
SAKEN003 8 4705 a 2029 SCC mec _type_III (3A) Kisumu CAI Outpatient
SAKEN004 8 241 37 SCC mec _type_III (3A) Kisumu HAI In-patient
SAKEN005 8 241 37 SCC mec _type_III (3A) Kisumu CAI In-patient
SAKEN008 152 152 355 SCC mec _type_IVa (2B) Nairobi CAI Out-patient
SAKEN010 5 39 7 SCC mec _type_II (2A) Kisumu CAI Out-patient
SAKEN027 8 241 37 SCC mec _type_III (3A) Kisumu HAI In-patient
SAKEN031 8 8 1476 novel cassette: mecA present Nairobi CAI Out-patient
MSSA SAKEN017 15 15 84 n/a Kericho CAI Out-patient
SAKEN024 22 22 5 n/a Kericho CAI Out-patient
SAKEN032 80 80 13,194 n/a Kericho CAI Out-patient
SAKEN026 121 121 314 n/a Kericho CAI Out-patient
SAKEN009 152 152 355 n/a Kericho CAI In-patient
SAKEN016 152 152 355 n/a Kericho CAI Out-patient
SAKEN025 5 4707a 17826a n/a Kisumu CAI Out-patient
SAKEN030 8 8 unknown n/a Kisumu CAI In-patient
SAKEN019 15 15 unknown n/a Kisumu CAI In-patient
SAKEN018 88 88 186 n/a Kisumu CAI Out-patient
SAKEN029 121 121 272 n/a Kisumu CAI Out-patient
SAKEN002 152 152 355 n/a Kisumu CAI Out-patient
SAKEN011 8 8 64 n/a Kisumu CAI In-patient
SAKEN012 8 8 64 n/a Kisumu CAI In-patient
SAKEN021 80 80 13,194 n/a Kisumu CAI Out-patient
SAKEN020 152 152 355 n/a Kisumu CAI In-patient
SAKEN028 580 580 unknown n/a Malindi CAI Out-patient
SAKEN013 22 22 84 n/a Nairobi CAI Out-patient
SAKEN007 80 80 5941 n/a Nairobi CAI In-patient
SAKEN006 121 121 4198 n/a Nairobi CAI In-patient
SAKEN014 152 152 355 n/a Nairobi HAI In-patient
SAKEN015 152 1633 355 n/a Nairobi HAI In-patient
SAKEN022 152 152 355 n/a Nairobi CAI Out-patient
SAKEN023 152 152 355 n/a Nairobi CAI In-patient
  1. adenotes a novel ST and spa type. bCAI community-acquired infection, HAI hospital-acquired infection. MRSA isolates are shown in bold