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Table 1 CpG motifs and copy numbers in the whole genome of LAB strains. Copy number of typical CpG motifs in the whole genome of L. lactis LC-Plasma, L. rhamnosus ATCC 53103, and NCC2706 were determined as described in Methods

From: Characterization of genomic DNA of lactic acid bacteria for activation of plasmacytoid dendritic cells

  Bacterial strains
Lactococcus lactis LC-Plasma Lactobacillus rhamnosus ATCC 53103 Bifidobacterium longum NCC2705
pDC activating   RRCGRYCGYY 51 195 288
RYCGRY 3072 17,681 25,057
B cell activating optimal for mice RRCGYY 4691 13,169 13,118
optimal for human GTCGTT 882 1534 1295
CpG hexamer NNCGNN 61,462 180,144 240,176