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Table 1 Metabarcoding primer sequences targeting the ITS region used in this study

From: Profiling grapevine trunk pathogens in planta: a case for community-targeted DNA metabarcoding

Primer name

Direction

Primer sequence 5′ to 3′

Citation

GTAA

Forward

AAAACTTTCAACAACGGATC

this study

GTAA

Reverse

TYCCTACCTGATCCGAGGTC

this study

BITS

Forward

CTACCTGCGGARGGATCA

[48]

BITS

Reverse

GAGATCCRTTGYTRAAAGTT

[48]

SP

Forward

CTTGGTCATTTAGAGGAAGTAA

[49]

SP

Reverse

GCTGCGTTCTTCATCGATGC

[49]