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Fig. 5 | BMC Microbiology

Fig. 5

From: Bradyrhizobium diazoefficiens USDA110 PhaR functions for pleiotropic regulation of cellular processes besides PHB accumulation

Fig. 5

Prediction of putative PhaR-binding consensus sequence. Nucleotide sequences of the promoter regions of phaP5, phaR, phaZ1, phaZ3, the cyoABCD operon, and the exoZ-containing operon starting with blr2367 were aligned with three 12-mer sequences for PhaR-binding found in the phaP1 and phaP4 promoter regions by GLAM2 in MEME suit under the default settings for analysis to deduce a motif for PhaR binding. The graphical summary of GLAM2 analysis is shown with the consensus sequence TGCRNYGCASMA (R: A or G, Y: C or T, S: C or G, M: A or C) at the bottom

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