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Table 1 Identities of putative genes involved in phenol or benzoate-degradation

From: Enzymes involved in the anaerobic degradation of phenol by the sulfate-reducing bacterium Desulfatiglans anilini

Enzymes in T. aromatica or G. metallireducens a

Annotation from IMG in D. anilini

Gene locus (H567DRAFT_) b

Mol. weight (kDa)

Sequence coverage (%) c

Score d

Identities (%) e

ppsα

pyruvate, water dikinase

02052

70.027

49.1

323.31

42

ppsβ

pyruvate, water dikinase

02051

39.928

21.2

93.396

38

ppsγ

acetoin utilization protein AcuB

03126

25.893

35.4

202.27

25

ppcβ

phenylphosphate carboxylase beta subunit

02059

52.24

68.2

323.31

49

ppcδ

3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase)

00862

46

ppcα

phenylphosphate carboxylase beta subunit

03563

51.922

12.9

76.233

33

ORF 14

phenylacetate--CoA ligase

02049

50.501

9

68.567

39

ORF 8

4-hydroxy-3-polyprenylbenzoate decarboxylase

02056

56

BamQ*

6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase

01120

39.75

42.1

282.42

49

BamA*

6-ketocyclohex-1-ene-1-carbonyl-CoA hydrolase

01121

42.886

72.7

323.31

51

BamR*

cyclohexa-1,5-diene-1-carbonyl-CoA hydratase

01122

28.001

55.7

323.31

37

BamB*

tungsten-dependent benzoyl-CoA reductase subunit bamB

00366

75.838

46.1

323.31

80

  1. aAbbreviations of the enzymes involved in phenol or benzoate (*) anaerobic degradation pathways in T. aromatica or G. metallireducens (*). bIMG gene locus tag from the genome of D. anilini. cSequence coverage represents the extent of peptides obtained during MS-MS identification of respective protein in the total proteome analyses. dThe protein score from an MS/MS search is derived from the ions scores. Score and sequence coverage of the peptide finger print match as indicated by the MASCOT-search engine. eThe highest identity of protein sequence in D. anilini to that in T. aromatica or G. metallireducens. -: Not found in total proteome analyses result