Table 2 Differential expression of proteins in infectious conditions related to adhesion, biofilm, and LPS biosynthesis
SPOT | PROTEIN | Product | Gene name | Expression | XAM1/NB | 3DAI/NB | 5DAI/NB | CLASS |
|---|---|---|---|---|---|---|---|---|
1 | XAC1882 | Aconitase | rpfA | Up | 5.71 | 6.92 | 7.59 | A/B/LPS |
8 | XAC3239 | Pilus biogenesis protein | pilB | Up | 1.48 | 4.33 | 9.39 | A/B/LPS |
9 | XAC3300 | Lipase | estA | Up | 1.93 | 21.98 | 96.64 | A/B/LPS |
11 | XAC3579 | Phosphoglucomutase | xanA | Up | 0.19 | 3.91 | 7.29 | A/B/LPS |
13 | XACb0007 XAC3225 | Lytic mureintransglycosylase Transglycosylase | mlt mltB | Up | 8.11 | 71.06 | 113.00 | A/B/LPS |
17 | XAC3602 | Cystathionine gamma-lyase-like protein | metB | Up | 0.00 | 2.67 | 12.91 | A/B/LPS |
18 | XAC2504 | Regulator of pathogenicity factors | rpfN | Up | 354.75 | 6.19 | 13.17 | A/B/LPS |
21 | XAC3456 | 3-isopropylmalate dehydrogenase | leuB | Up | 43.75 | 7.62 | 18.57 | A/B/LPS |
22 | XAC1017 | ABC transporter sulfate binding protein | sbp | Up | 45.65 | 13.96 | 1.78 | A/B/LPS |
23 | XAC0656 | Rod shape-determining protein | mreB | Up | 0.96 | 3.08 | 8.57 | A/B/LPS |
25 | XAC4349a | Bifunctional oxireductase/alginate lyase | algL | Up | 2.79 | 0.12 | 3.43 | A/B/LPS |
33 | XAC0785 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | lpxC | Up | 1.33 | 0.27 | 2.48 | A/B/LPS |
34 | XAC3584 | Glucose-1-phosphate thymidylyltransferase | rmlA | Up | 1.74 | 2.14 | 2.33 | A/B/LPS |
36 | XAC2292 | UTP-glucose-1-phosphate uridylyltransferase | galU | Up | 1.49 | 1.80 | 1.57 | A/B/LPS |
37 | XAC4219 | Lipid-binding SYLF domain | ---- | Up | 30.72 | 20.18 | 8.09 | A/B/LPS |
40 | XAC3966 | Outer membrane lipoprotein SlyB | slyB | Up | 2.45 | 3.17 | 4.10 | A/B/LPS |
42 | XAC0623 | Putative salt-induced outer membrane protein YdiY | ydiY | Up | 6.83 | 8.70 | 1.38 | A/B/LPS |
43 | XAC0190 | Uncharacterized lipoprotein | ---- | Up | 2.21 | 1.30 | 4.24 | A/B/LPS |
44 | XAC0834 | Two-component system regulatory protein | colR | Up | 1.58 | 2.01 | 2.50 | A/B/LPS |
49 | XAC3457 | 3-isopropylmalate dehydratase small subunit | leuD | Up | 65.18 | 2.46 | 8.27 | A/B/LPS |
54 | XAC1028 | Phosphoglycerate mutase | pgmA | Up | 3.46 | 6.88 | 0.77 | A/B/LPS |
68 | XAC1344 | Cytoskeletal protein CcmA, bactofilin family | ccmA | Up | 1.89 | 9.49 | 8.66 | A/B/LPS |
77 | XAC0108 | Atse | atsE | Up | 9.99 | 22.76 | 27.21 | A/B/LPS |
78 | XAC1154 | Regulatory protein pilH family | pilH | Up | _ | 1.00 | 1.00 | A/B/LPS |
81 | XAC3671* | Uncharacterized conserved protein YajQ, UPF0234 family | yajQ | Up | 8.74 | 84.52 | 0.19 | A/B/LPS |
123 | XAC1717 | 2-dehydro-3-deoxyphosphooctonate aldolase | kdsA | Down | 0.51 | 0.06 | 0.07 | A/B/LPS |
129 | XAC2008 | Outer-membrane lipoproteins carrier protein precursor | lolA | Down | 0.08 | 0.05 | 0.00 | A/B/LPS |