Table 2 PacBio raw sequence reads across different sample sets
From: Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification
Filtered raw sequence reads | ||||
|---|---|---|---|---|
Samples used for sequencing | ≥1 Pass | ≥2 Passes | ≥4 Passes | ≥8 Passes |
Staphylococcus aureus | 43268 | 41756 (13.5%) | 37136 (14.2%) | 28042 (35.2%) |
50 pooled stool colonies | 43133 | 41628 (13.5%) | 36839 (14.6%) | 27369 (36.5%) |
11 bar-coded human | 68206 | 66674 (12.2%) | 58951 (13.6%) | 38620 (43.4%) |
Vaginal samples | ||||