Microbiota of wild-caught Red Snapper Lutjanus campechanus

BMC Microbiology

Table 2 Results of 454 pyrosequencing from each Red Snapper individual and sample type

Fish ID	Sample type	Original # sequences	Original # OTUs	Final # sequences	Final # OTUs	Expected # OTUs	Good's coverage	Shannon evennness index
01B	Blood	2263	48	950	43	56	0.991	0.724
04B	Blood	3019	83	950	64	103	0.98	0.735
08B	Blood	950	49	950	49	99	0.991	0.712
10B	Blood	2495	52	950	46	62	0.988	0.665
01G	Gill	3055	74	950	59	103	0.984	0.599
02G	Gill	2581	80	950	68	104	0.981	0.602
03G	Gill	9276	91	950	51	102	0.984	0.533
04G	Gill	3045	81	950	61	101	0.982	0.455
05G	Gill	11888	153	950	90	245	0.963	0.689
06G	Gill	4000	134	950	90	170	0.973	0.762
07G	Gill	4170	109	950	75	247	0.983	0.816
08G	Gill	3140	77	950	64	107	0.986	0.706
09G	Gill	4355	76	950	54	121	0.986	0.649
05 F	Feces	3859	109	950	74	147	0.973	0.545
06 F	Feces	3669	141	950	99	195	0.967	0.704
07 F	Feces	4156	92	950	66	141	0.987	0.8
08 F	Feces	4626	116	950	72	354	0.966	0.512
09 F	Feces	2595	66	950	53	126	0.986	0.727
10 F	Feces	3154	107	950	80	251	0.968	0.591
Average	Blood	2182	58	950	51	80	0.988	0.709
	Gill	5057	97	950	68	144	0.98	0.646
	Feces	3677	105	950	74	202	0.975	0.647

Averages for each sample type are included. Original sequences and # OTUs are from non-standardized data whereas final sequences and # OTUs are after standardizing to 950 sequences per sample (sample 08B)

ISSN: 1471-2180