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Table 2 Assemblages and sub-assemblages of G. duodenalis determined by the three genes

From: Multilocus genotyping of Giardia duodenalis isolates from children in Oromia Special Zone, central Ethiopia

Study site Isolate code Children Assemblages and sub-assemblages
Sex Age tpi bg gdh
Holetta HH-02 F 5-14 years B (B2) B B*
HH-06 F 5-14 years AII AII AII
HH-13 M <5 years B* B
HH-25 M 5–14 years AII AII
HH-34 M 5–14 years B (B2) B
HH-49 M 5–14 years B B* B*
HH-55 M 5–14 years A (A3)
HH-57 M <5 years A (A3)
HH-70 F 5–14 years B (B2) B (B3) B*
HH-71 M <5 years B* B B*
HH-72 M <5 years B* B (B3) B*
HH-78 M 5–14 years B*
HH-80 M 5–14 years AII
HH-84 F <5 years B (WB9) B B*
HH-93 M 5–14 years AII AII AII
Sendafa SH-03 F 5–14 years B (B2) - BIV
SH-12 M 5–14 years B (B2) B* B*
SH-14 M 5–14 years B B* B*
SH-18 M 5–14 years B B (B3) B*
SH-20 M <5 years AII AII AII
SH-33 F 5–14 years AII AII AII
SH-35 F 5–14 years B (B2) B (B3) B*
SH-38 M 5–14 years AII AII
SH-43 F <5 years B (WB8) B (B3) B*
SH-48 F 5–14 years B
SH-49 M 5–14 years B (B2) B* B*
SH-51 F <5 years B
SH-54 M 5–14 years B (B2) B B*
SH-69 M 5–14 years AII AII AII
SH-74 M 5–14 years B (B2)
SH-75 F 5–14 years B B B*
SH-82 M 5–14 years AII AII AII
SH-83 F 5–14 years B* B B*
SH-92 M 5–14 years B (WB9) B B*
SH-93 F 5–14 years B (B2) B B*
Chancho CH-20 F 5–14 years B (B2)
CH-26 F 5–14 years B (WB9) B (B3) B*
CH-36 F 5–14 years B* B (B3)
CH-37 F 5–14 years B* B
CH–40 M 5–14 years B* B (B3)
CH-44 M 5–14 years B (B2) B B*
CH-49 F 5–14 years B*
CH-55 M <5 years B (B2) B B*
DH-07 F 5–14 years B B*
DH-08 F 5–14 years B (B2) B
DH-11 M 5–14 years B (B2)
DH-17 M 5–14 years B B
DH-21 M 5–14 years B (B2) B (B3)
  1. Key: Asterisks (*) indicate novel genotypes; hyphens (–) indicate PCR-negative results
  2. The sub-assemblages B2, B3, WB9 and WB8 were based on the BLAST results