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Table 3 Alpha-diversity of intestinal microbiota of rice frogs (Fejervarya limnocharis) at the natural habitat (N1 ~ N3) and farmland (F1 ~ F3)

From: Changes of diet and dominant intestinal microbes in farmland frogs

Sample OTUs Coverage Community richness Community diversity
ACE (95 % CI) Chao1 (95 % CI) Shannon index (95 % CI) Simpson index (95 % CI)
N1 540 0.774 640.451 (609.752, 684.662) 653.554 (611.576, 720.152) 720.152 (4.850, 4.907) 4.907 (0.022, 0.025)
N2 291 0.753 361.315 (334.879, 403.679) 370.875 (334.723, 436.919) 436.919 (3.522, 3.583) 3.583 (0.085, 0.091)
N3 458 0.799 524.321 (501.485, 559.152) 541.720 (507.338, 600.063) 600.063 (3.398, 3.442) 3.442 (0.100, 0.104)
F1 660 0.765 797.248 (759.731, 848.877) 794.101 (749.071, 861.895) 861.895 (4.950, 5.001) 5.001 (0.018, 0.019)
F2 1011 0.687 1358.822 (1287.073, 1449.218) 1385.211 (1289.752, 1513.360) 1513.360 (5.275, 5.320) 5.320 (0.013, 0.014)
F3 590 0.619 863.048 (797.642, 949.057) 839.505 (766.514, 942.678) 942.678 (2.928, 2.993) 2.993 (0.148, 0.155)
  1. ACE abundance coverage-based estimator