Table 3 Alpha-diversity of intestinal microbiota of rice frogs (Fejervarya limnocharis) at the natural habitat (N1 ~ N3) and farmland (F1 ~ F3)
From: Changes of diet and dominant intestinal microbes in farmland frogs
Sample | OTUs | Coverage | Community richness | Community diversity | ||
|---|---|---|---|---|---|---|
ACE (95Â % CI) | Chao1 (95Â % CI) | Shannon index (95Â % CI) | Simpson index (95Â % CI) | |||
N1 | 540 | 0.774 | 640.451 (609.752, 684.662) | 653.554 (611.576, 720.152) | 720.152 (4.850, 4.907) | 4.907 (0.022, 0.025) |
N2 | 291 | 0.753 | 361.315 (334.879, 403.679) | 370.875 (334.723, 436.919) | 436.919 (3.522, 3.583) | 3.583 (0.085, 0.091) |
N3 | 458 | 0.799 | 524.321 (501.485, 559.152) | 541.720 (507.338, 600.063) | 600.063 (3.398, 3.442) | 3.442 (0.100, 0.104) |
F1 | 660 | 0.765 | 797.248 (759.731, 848.877) | 794.101 (749.071, 861.895) | 861.895 (4.950, 5.001) | 5.001 (0.018, 0.019) |
F2 | 1011 | 0.687 | 1358.822 (1287.073, 1449.218) | 1385.211 (1289.752, 1513.360) | 1513.360 (5.275, 5.320) | 5.320 (0.013, 0.014) |
F3 | 590 | 0.619 | 863.048 (797.642, 949.057) | 839.505 (766.514, 942.678) | 942.678 (2.928, 2.993) | 2.993 (0.148, 0.155) |