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Table 1 Descriptive analysis of MLST data genetic variability at L. plantarum loci

From: Use of multilocus sequence typing to infer genetic diversity and population structure of Lactobacillus plantarum isolates from different sources

Gene   No. of πa/site G + C content (mol%)    d N /d S b
Length (bp) Alleles Polymorphic sites sSNP nSNP
clpX 443 9 8 0.00401 45.77 % 7 1 0.0429
groEL 641 11 63 0.03220 43.93 % 6 59 0.0177
murC 462 11 10 0.00502 43.66 % 5 4 0.2692
murE 607 15 22 0.00855 51.38 % 16 6 0.0436
pheS 536 12 15 0.00693 46.09 % 10 5 0.0648
pyrG 415 7 9 0.00803 43.28 % 8 1 0.0255
recA 546 9 10 0.00549 45.00 % 10 0 0
uvrC 620 12 21 0.01166 43.10 % 18 3 0.0279
concatenated 4251 80 158 0.00464 45.28 % 80 79 0.0401
  1. aMean pairwise nucleotide difference per site
  2. b d N/d S represents the ratio of nonsynonymous to synonymous substitutions