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Table 1 MetaStats analysis of relative abundance (>0.5 %)

From: Cilantro microbiome before and after nonselective pre-enrichment for Salmonella using 16S rRNA and metagenomic sequencing

 

%T0

%24-hour

Fold change

P value

a.) The most abundant members at time zero

Oxalobacteraceae

38.63

0.96

−40.21

0.0002

Pseudomonadaceae

10.62

1.36

−7.79

0.0158

Flavobacteriaceae

7.33

0.22

−33.12

0.0002

Comamonadaceae

5.03

2.43

−2.07

0.1982

Xanthomonadaceae

4.11

0.87

−4.72

0.0154

Rhizobiaceae

3.57

0.13

−27.76

0.0002

Methylobacteriaceae

3.50

0.03

−140.14

0.0002

Micrococcaceae

2.52

0.01

−176.45

0.0002

Sphingomonadaceae

2.28

0.03

−79.78

0.0002

Weeksellaceae

2.20

0.07

−33.30

0.0002

Rhodobacteraceae

2.11

0.03

−73.74

0.0002

Microbacteriaceae

2.06

0.02

−104.63

0.0002

[Exiguobacteraceae]

1.84

6.20

3.37

0.0002

Caulobacteraceae

1.58

0.03

−55.16

0.0002

Rickettsiales

1.32

0.01

−92.45

0.0002

Sphingobacteriaceae

1.29

0.08

−17.20

0.0002

Enterobacteriaceae

1.14

3.59

3.13

0.0288

Aurantimonadaceae

1.01

0.01

−93.98

0.0002

Paenibacillaceae

0.99

1.51

1.52

0.1238

Rhizobiales;Other

0.62

0.04

−14.56

0.0002

Bacillaceae

0.61

3.08

5.01

0.0002

Cytophagaceae

0.60

0.01

−111.36

0.0002

b.) The most abundant members after a 24-hour mBPW enrichment

Peptostreptococcaceae

0.01

40.79

2957.09

0.0002

Planococcaceae

0.31

19.49

62.11

0.0002

Clostridiaceae

0.03

13.54

490.93

0.0002

[Exiguobacteraceae]

1.84

6.20

3.37

0.0002

Enterobacteriaceae

1.14

3.59

3.13

0.0288

Bacillaceae

0.61

3.08

5.01

0.0002

Comamonadaceae

5.03

2.43

−2.07

0.1982

Lachnospiraceae

0.00

1.82

527.18

0.0002

Paenibacillaceae

0.99

1.51

1.52

0.1238

Clostridiales;Other

0.00

1.50

∞

0.0002

Pseudomonadaceae

10.62

1.36

−7.79

0.0158

Oxalobacteraceae

38.63

0.96

−40.21

0.0002

Xanthomonadaceae

4.11

0.87

−4.72

0.0154

Aeromonadaceae

0.00

0.57

164.68

0.0002